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L3_106_000M1_scaffold_7625

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_7625_1
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..679)
DNA (678bp) protein (226aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B444_CLOA9
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:AFS79331.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
L3_106_000M1_scaffold_7625_2
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1041..1583
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI0002FA670B
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
L3_106_000M1_scaffold_7625_3
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1599..2093
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GMT9_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO37152.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_106_000M1_scaffold_7625_4
unknown

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2531..2641
DNA (111bp) protein (37aa)

This feature has no annotations

L3_106_000M1_scaffold_7625_5
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2826..4061
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5ALG1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX41617.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
putative peptidoglycan-binding domain-containing protein
L3_106_000M1_scaffold_7625_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4417..4917)
DNA (501bp) protein (167aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=8 Tax=Clostridium clostridioforme RepID=G5I0N5_9CLOT
L3_106_000M1_scaffold_7625_7
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4928..5788)
DNA (861bp) protein (287aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
thyA; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZ11_9FIRM
L3_106_000M1_scaffold_7625_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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6578..7237
DNA (660bp) protein (220aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5S5_9CHLR
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EFH80336.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
two component transcriptional regulator, winged helix family
L3_106_000M1_scaffold_7625_9
unknown

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7234..7491
DNA (258bp) protein (86aa)

This feature has no annotations

Displaying 9 items

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