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L3_106_000M1_scaffold_12187

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_12187_1
Synergistes sp. 3_1_syn1, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

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97..1272
DNA (1176bp) protein (392aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=457415 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes sp. 3_1_syn1.;"
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PWA0_9BACT
L3_106_000M1_scaffold_12187_2
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1262..2353
DNA (1092bp) protein (364aa)
aroC; Chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
Chorismate synthase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M255_9FIRM
L3_106_000M1_scaffold_12187_3
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2350..3432
DNA (1083bp) protein (361aa)
Chorismate mutase {ECO:0000313|EMBL:EDS09020.1}; EC=5.4.99.5 {ECO:0000313|EMBL:EDS09020.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
pheA2; bifunctional chorismate mutase/prephenate dehydratase (EC:4.2.1.51 5.4.99.5)
Chorismate mutase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHQ2_9FIRM
L3_106_000M1_scaffold_12187_4
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3429..3920
DNA (492bp) protein (164aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Shikimate kinase n=2 Tax=Megasphaera RepID=S7J024_9FIRM
shikimate kinase
L3_106_000M1_scaffold_12187_5
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3897..4310)
DNA (414bp) protein (138aa)
Shikimate dehydrogenase {ECO:0000313|EMBL:CCE01268.1}; EC=1.1.1.25 {ECO:0000313|EMBL:CCE01268.1};; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
shikimate 5-dehydrogenase I alpha (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T491_9BRAD
Displaying 5 items

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