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L3_106_000M1_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 215 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_50_1
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51..1427)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B9W3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD61332.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
multidrug resistance protein, MATE family
L3_106_000M1_scaffold_50_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1701..3386)
DNA (1686bp) protein (562aa)
inorganic diphosphatase (EC:3.6.1.1)
CBS domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H203_9FIRM
CBS domain protein {ECO:0000313|EMBL:EEU98071.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_106_000M1_scaffold_50_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3585..4271)
DNA (687bp) protein (229aa)
TIGR00266 family protein n=3 Tax=Lachnospiraceae RepID=A7B5U6_RUMGN
TIGR00266 family protein {ECO:0000313|EMBL:ETD17608.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
conserved hypothetical protein TIGR00266
L3_106_000M1_scaffold_50_4
unknown

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4418..4825
DNA (408bp) protein (136aa)

This feature has no annotations

L3_106_000M1_scaffold_50_5
unknown

Not on your lists

comp(4899..4994)
DNA (96bp) protein (32aa)

This feature has no annotations

L3_106_000M1_scaffold_50_6
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5124..5999)
DNA (876bp) protein (292aa)
Cof-like hydrolase n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XY45_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EOS81437.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L3_106_000M1_scaffold_50_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6081..6377
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46169.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
TrpR homolog YerC/YecD
L3_106_000M1_scaffold_50_8
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(6456..6929)
DNA (474bp) protein (158aa)
ADP-ribose pyrophosphatase (EC:3.6.1.-)
Mutator MutT protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ICX3_9FIRM
Mutator MutT protein {ECO:0000313|EMBL:CCY39938.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L3_106_000M1_scaffold_50_9
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7371..8333
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LDU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET61147.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_106_000M1_scaffold_50_10
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8339..9418
DNA (1080bp) protein (360aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Coprococcus catus GD/7 RepID=D4J786_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBK80207.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_106_000M1_scaffold_50_11
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9415..10368
DNA (954bp) protein (318aa)
CoA-substrate-specific enzyme activase, putative n=1 Tax=Coprococcus catus GD/7 RepID=D4J785_9FIRM
CoA-substrate-specific enzyme activase, putative
CoA-substrate-specific enzyme activase, putative {ECO:0000313|EMBL:CBK80206.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_106_000M1_scaffold_50_12

Not on your lists

comp(10532..11824)
DNA (1293bp) protein (431aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL87789.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative TIM-barrel fold metal-dependent hydrolase id=4349576 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=Mesotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
TIM-barrel fold metal-dependent hydrolase
L3_106_000M1_scaffold_50_13
unknown

Not on your lists

comp(11821..12105)
DNA (285bp) protein (95aa)

This feature has no annotations

L3_106_000M1_scaffold_50_14
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12122..13129)
DNA (1008bp) protein (336aa)
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IM70_DESMD
DMT(drug/metabolite transporter) superfamily permease
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:AFQ42680.1}; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB; 13706 / S10).;"
L3_106_000M1_scaffold_50_15
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13293..13955
DNA (663bp) protein (221aa)
Transcriptional regulator n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7ELK8_CLOPA
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:ADO37612.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_106_000M1_scaffold_50_16
Clostridium sp. K25, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14153..15022
DNA (870bp) protein (290aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VRX3_CLOBO
MerR family transcriptional regulator {ECO:0000313|EMBL:KEI10178.1}; TaxID=1443109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. K25.;"
MerR family transcriptional regulator
L3_106_000M1_scaffold_50_17
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15194..16165
DNA (972bp) protein (324aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Phyllobacterium sp. YR531 RepID=J2W095_9RHIZ
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EJN05940.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
putative hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
L3_106_000M1_scaffold_50_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16427..17044
DNA (618bp) protein (206aa)
4Fe-4S binding domain protein n=2 Tax=Oscillibacter RepID=U2QX52_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:ERK63306.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
(4Fe-4S)-binding protein
L3_106_000M1_scaffold_50_19
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17088..17738
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G8L8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13488.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
glycine betaine ABC transporter substrate-binding protein
L3_106_000M1_scaffold_50_20
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17740..18684
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JYJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS39178.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
glycine betaine ABC transporter substrate-binding protein
L3_106_000M1_scaffold_50_21
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18724..19458
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AP43_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ26244.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
nitrate/sulfonate/bicarbonate ABC transporter
L3_106_000M1_scaffold_50_22
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19463..19792
DNA (330bp) protein (110aa)
Transcriptional regulator HxlR family n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAQ7_9CLOT
Transcriptional regulator HxlR family {ECO:0000313|EMBL:CDD75244.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
transcriptional regulator, HxlR family
L3_106_000M1_scaffold_50_23
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19845..20666)
DNA (822bp) protein (274aa)
Formate/nitrite transporter n=1 Tax=Dorea sp. 5-2 RepID=R9NCM4_9FIRM
Formate/nitrite transporter {ECO:0000313|EMBL:EOS81069.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Formate/nitrite family of transporters
L3_106_000M1_scaffold_50_24
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20663..21298)
DNA (636bp) protein (212aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256|HAMAP-Rule:MF_00316}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000373FF84
molybdopterin-guanine dinucleotide biosynthesis protein
L3_106_000M1_scaffold_50_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21435..22688)
DNA (1254bp) protein (418aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIE8_9FIRM
L3_106_000M1_scaffold_50_26
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22909..23358
DNA (450bp) protein (150aa)
Peptidyl-tRNA hydrolase n=1 Tax=Slackia piriformis YIT 12062 RepID=K0Z8W0_9ACTN
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:EJZ83810.1}; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
peptidyl-tRNA hydrolase
L3_106_000M1_scaffold_50_27
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23511..23975)
DNA (465bp) protein (155aa)
Glyoxalase family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PBB8_9FIRM
Glyoxalase family protein {ECO:0000313|EMBL:EDS11448.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_106_000M1_scaffold_50_28
unknown

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comp(24087..24356)
DNA (270bp) protein (90aa)

This feature has no annotations

L3_106_000M1_scaffold_50_29
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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comp(24372..24938)
DNA (567bp) protein (189aa)
Putative manganese efflux pump MntP n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D4T6_9FIRM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
Predicted membrane protein
L3_106_000M1_scaffold_50_30
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25360..25605
DNA (246bp) protein (82aa)
Phosphocarrier, HPr family id=4072876 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Phosphocarrier HPr family {ECO:0000313|EMBL:CDA89252.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
crh; HPr-like protein Crh
Displaying items 1-30 of 215 in total

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