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L3_106_000M1_scaffold_1195

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_1195_1
unknown

Not on your lists

comp(691..846)
DNA (156bp) protein (52aa)

This feature has no annotations

L3_106_000M1_scaffold_1195_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1697..2149
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YSE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM46138.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_106_000M1_scaffold_1195_3
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

2308..2610
DNA (303bp) protein (101aa)
Integrase family protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HDB9_9FIRM
Integrase family protein {ECO:0000313|EMBL:CCY26099.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_106_000M1_scaffold_1195_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3182..3421
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6W8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56132.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_106_000M1_scaffold_1195_5
unknown

Not on your lists

comp(3554..4102)
DNA (549bp) protein (183aa)

This feature has no annotations

L3_106_000M1_scaffold_1195_6
unknown

Not on your lists

comp(4118..4309)
DNA (192bp) protein (64aa)

This feature has no annotations

L3_106_000M1_scaffold_1195_7
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4306..6279)
DNA (1974bp) protein (658aa)
UvrABC system protein B n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZB6_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
uvrB; UvrABC system protein B
L3_106_000M1_scaffold_1195_8
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

6452..6970
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AY76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45707.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_106_000M1_scaffold_1195_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7061..7927)
DNA (867bp) protein (289aa)
Hypothetical cytosolic protein n=1 Tax=Geobacillus thermodenitrificans (strain NG80-2) RepID=A4IRU8_GEOTN
Uncharacterized protein {ECO:0000313|EMBL:KGF54702.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_106_000M1_scaffold_1195_10
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8139..9077
DNA (939bp) protein (313aa)
Transcriptional regulator, LysR family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PH68_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EDS09316.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
LysR family transcriptional regulator
L3_106_000M1_scaffold_1195_11
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9433..10983
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DNE8_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERI98335.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
hypothetical protein
L3_106_000M1_scaffold_1195_12
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11509..12087
DNA (579bp) protein (193aa)
pyruvate synthase (EC:1.2.7.1)
Pyruvate ferredoxin oxidoreductase, gamma subunit n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AX70_SYNWW
Tax=BJP_IG2069_Clostridiales_42_11
L3_106_000M1_scaffold_1195_13

Not on your lists

12084..12380
DNA (297bp) protein (99aa)
2-oxoacid:acceptor oxidoreductase delta subunit pyruvate/2-ketoisovalerate family n=1 Tax=Clostridium sp. CAG:62 RepID=R7CBP1_9CLOT
Pyruvate synthase subunit porD {ECO:0000313|EMBL:AHF25917.1}; TaxID=1393650 species="Bacteria; environmental samples.;" source="uncultured bacterium Contigcl_1539.;"
pyruvate synthase subunit porD
L3_106_000M1_scaffold_1195_14
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

12387..13586
DNA (1200bp) protein (400aa)
Pyruvate ferredoxin oxidoreductase alpha subunit n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HR24_9FIRM
Pyruvate ferredoxin oxidoreductase alpha subunit {ECO:0000313|EMBL:CCY27292.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
pyruvate synthase subunit porA
L3_106_000M1_scaffold_1195_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13576..14511
DNA (936bp) protein (312aa)
porB; pyruvate synthase subunit PorB (EC:1.2.7.1)
Putative pyruvate synthase n=2 Tax=Oscillibacter RepID=U2QXK7_9FIRM
Putative pyruvate synthase {ECO:0000313|EMBL:ERK67822.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_106_000M1_scaffold_1195_16
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14668..15798
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2G1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM97548.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_106_000M1_scaffold_1195_17
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15867..16592
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KXX2_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK98576.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_106_000M1_scaffold_1195_18
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

16637..17806
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CXS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81338.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L3_106_000M1_scaffold_1195_19
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17860..18930
DNA (1071bp) protein (357aa)
Uncharacterized protein (Fragment) n=2 Tax=Oscillibacter RepID=U2QW24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK56779.1}; Flags: Fragment;; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_106_000M1_scaffold_1195_20
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18990..19484)
DNA (495bp) protein (165aa)
Membrane-associated phospholipid phosphatase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SXY5_ROSHA
membrane-associated phospholipid phosphatase
Membrane-associated phospholipid phosphatase {ECO:0000313|EMBL:AEN97411.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_106_000M1_scaffold_1195_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19481..20047)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YR76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57167.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_106_000M1_scaffold_1195_22
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20228..20671)
DNA (444bp) protein (148aa)
Predicted P-loop ATPase fused to an acetyltransferase n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LBC9_RUMC1
Predicted P-loop ATPase fused to an acetyltransferase
Predicted P-loop ATPase fused to an acetyltransferase {ECO:0000313|EMBL:CBL16924.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L3_106_000M1_scaffold_1195_23
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20678..22432)
DNA (1755bp) protein (585aa)
Fibronectin-binding protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TEK2_9FIRM
Fibronectin-binding protein {ECO:0000313|EMBL:CDC71858.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
fibronectin-binding protein
L3_106_000M1_scaffold_1195_24
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22470..23378)
DNA (909bp) protein (303aa)
Transcriptional regulator, LysR family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EG30_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEQ57165.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
LysR family transcriptional regulator
L3_106_000M1_scaffold_1195_25
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23756..24076
DNA (321bp) protein (107aa)
Carboxymuconolactone decarboxylase family protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L2D7_9FIRM
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:CDE82196.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
L3_106_000M1_scaffold_1195_26
unknown

Not on your lists

24088..24489
DNA (402bp) protein (134aa)

This feature has no annotations

L3_106_000M1_scaffold_1195_27
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24328..25212)
DNA (885bp) protein (295aa)
LysR substrate binding domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJV3_CLOSV
LysR substrate binding domain protein {ECO:0000313|EMBL:EDS05180.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Transcriptional regulator
L3_106_000M1_scaffold_1195_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25325..26695
DNA (1371bp) protein (457aa)
Transporter n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SFK3_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Na+-dependent transporters of the SNF family
L3_106_000M1_scaffold_1195_29
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26782..27585)
DNA (804bp) protein (268aa)
Zinc/iron permease n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JPM2_CELLD
zinc/iron permease
Tax=BJP_IG2069_Clostridiales_48_15
L3_106_000M1_scaffold_1195_30
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27575..28528)
DNA (954bp) protein (318aa)
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin-disulfide reductase n=1 Tax=Clostridium sp. CAG:43 RepID=R7AED3_9CLOT
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:CDD59163.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Displaying items 1-30 of 44 in total

View Taxonomy