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L3_106_000M1_scaffold_2642

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_2642_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(68..841)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YWT4_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93422.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
putative transporter
L3_106_000M1_scaffold_2642_2
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(879..2711)
DNA (1833bp) protein (611aa)
Adenylyl-sulfate kinase n=1 Tax=Clostridium sp. CAG:167 RepID=R5WBZ8_9CLOT
Adenylyl-sulfate kinase {ECO:0000313|EMBL:CCZ90037.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
adenylylsulfate kinase
L3_106_000M1_scaffold_2642_3
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2742..3638)
DNA (897bp) protein (299aa)
sulfate adenylyltransferase small subunit (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 2 {ECO:0000313|EMBL:AGC67207.1}; EC=2.7.7.4 {ECO:0000313|EMBL:AGC67207.1};; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
Sulfate adenylyltransferase small subunit n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VKE7_CLOSH
L3_106_000M1_scaffold_2642_4
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3644..4750)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TQN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65599.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_106_000M1_scaffold_2642_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4954..6312)
DNA (1359bp) protein (453aa)
Penicillin-binding protein transpeptidase domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQ42_9FIRM
Penicillin-binding protein transpeptidase domain protein {ECO:0000313|EMBL:CDB27523.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative penicillin-binding protein A
L3_106_000M1_scaffold_2642_6
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(6309..8387)
DNA (2079bp) protein (693aa)
signal peptide protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B3079F
FHA domain protein {ECO:0000313|EMBL:CCY28147.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_106_000M1_scaffold_2642_7
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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8635..10086
DNA (1452bp) protein (484aa)
Trk system potassium uptake protein TrkH n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RVY6_9FIRM
Trk system potassium uptake protein TrkH {ECO:0000313|EMBL:CCZ45400.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
trkH; Trk system potassium uptake protein TrkH
L3_106_000M1_scaffold_2642_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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10116..10886
DNA (771bp) protein (257aa)
udp; uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase n=2 Tax=Clostridiales RepID=H1C6M4_9FIRM
Uridine phosphorylase {ECO:0000313|EMBL:EHO35760.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_106_000M1_scaffold_2642_9
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11015..11974)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2NIZ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK29098.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
L3_106_000M1_scaffold_2642_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12600..13442)
DNA (843bp) protein (281aa)
Transporter, small conductance mechanosensitive ion channel MscS family protein n=2 Tax=Oscillibacter RepID=U2QTT9_9FIRM
Transporter, small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:ERK64654.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative small-conductance mechanosensitive channel
L3_106_000M1_scaffold_2642_11
Bhargavaea cecembensis, Bhargavaea, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(13482..14372)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Bhargavaea cecembensis DSE10 RepID=M7NEG6_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EMR06948.1}; TaxID=1235279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Bhargavaea.;" source="Bhargavaea cecembensis DSE10.;"
SEC-C motif domain protein
L3_106_000M1_scaffold_2642_12
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14500..15048)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V379_CLOSS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK47208.1}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
L3_106_000M1_scaffold_2642_13
unknown

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comp(15137..16006)
DNA (870bp) protein (290aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:CBL37639.1}; EC=2.4.2.19 {ECO:0000313|EMBL:CBL37639.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Nicotinate-nucleotide pyrophosphorylase n=3 Tax=Clostridiales RepID=D4MYE4_9FIRM
L3_106_000M1_scaffold_2642_14
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15987..17279)
DNA (1293bp) protein (431aa)
L-aspartate oxidase n=1 Tax=Roseburia sp. CAG:182 RepID=R7R2N5_9FIRM
L-aspartate oxidase {ECO:0000313|EMBL:CDF43956.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
aspartate oxidase
L3_106_000M1_scaffold_2642_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17299..18204)
DNA (906bp) protein (302aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Quinolinate synthetase complex A subunit n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVL5_9FIRM
nadA; Quinolinate synthetase A
L3_106_000M1_scaffold_2642_16
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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18471..19400
DNA (930bp) protein (310aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
fabD; malonyl-CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LVV4_9FIRM
L3_106_000M1_scaffold_2642_17
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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19413..20600
DNA (1188bp) protein (396aa)
Propanoyl-CoA C-acyltransferase (EC:2.3.1.176)
Predicted acetyl-CoA acetyltransferase n=2 Tax=Clostridium RepID=D8GL62_CLOLD
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP69173.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
L3_106_000M1_scaffold_2642_18
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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20612..20962
DNA (351bp) protein (117aa)
Putative nucleic-acid-binding protein containing a Zn-ribbon n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AGJ9_9CLOT
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP69172.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
hypothetical protein
L3_106_000M1_scaffold_2642_19
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20989..21483
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6DP50_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA79647.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L3_106_000M1_scaffold_2642_20
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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21902..24010
DNA (2109bp) protein (703aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D6I0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD85127.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
putative extracellular nuclease
Displaying 20 items

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