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L3_106_000M1_scaffold_5424

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_5424_1
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(292..1473)
DNA (1182bp) protein (394aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
argD; acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11 2.6.1.17)
Acetylornithine aminotransferase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6T813_9FIRM
L3_106_000M1_scaffold_5424_2
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1473..2366)
DNA (894bp) protein (298aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
argB; acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MAL5_9FIRM
L3_106_000M1_scaffold_5424_3
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2573..3796)
DNA (1224bp) protein (408aa)
argJ; glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.1 2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ n=2 Tax=Oscillibacter RepID=U2R2R5_9FIRM
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_106_000M1_scaffold_5424_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3893..4834)
DNA (942bp) protein (314aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_01110};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01110}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=2 Tax=Clostridium symbiosum RepID=E9STQ1_CLOSY
L3_106_000M1_scaffold_5424_5
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4838..6223)
DNA (1386bp) protein (462aa)
argH; argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
Argininosuccinate lyase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KXF1_OSCVS
L3_106_000M1_scaffold_5424_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6482..7744)
DNA (1263bp) protein (421aa)
argG; Argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Argininosuccinate synthase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T8K4_9FIRM
L3_106_000M1_scaffold_5424_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8082..9071
DNA (990bp) protein (330aa)
galE; UDP-glucose 4-epimerase GalE (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B964_9CLOT
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ERI68373.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_106_000M1_scaffold_5424_8
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9270..9440
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6T793_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC68050.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L3_106_000M1_scaffold_5424_9
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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9614..9889
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S113_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46738.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_106_000M1_scaffold_5424_10
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9886..10251
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MC29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65412.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_106_000M1_scaffold_5424_11
unknown

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comp(10762..11037)
DNA (276bp) protein (92aa)

This feature has no annotations

L3_106_000M1_scaffold_5424_12
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11030..11218)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MSK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70772.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Displaying 12 items

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