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L3_106_000M1_scaffold_6229

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_6229_1
Tupaia chinensis, Tupaia, Scandentia, Mammalia, Chordata, Metazoa

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comp(149..991)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Tupaia chinensis RepID=L9KZZ8_TUPCH
Uncharacterized protein {ECO:0000313|EMBL:ELW68510.1}; TaxID=246437 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia.;" source="Tupaia chinensis (Chinese tree shrew).;"
L3_106_000M1_scaffold_6229_2
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1747..2694
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7EHM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE01022.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
hypothetical protein
L3_106_000M1_scaffold_6229_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2758..3492)
DNA (735bp) protein (245aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=2 Tax=Clostridium RepID=B6FQF2_9CLOT
L3_106_000M1_scaffold_6229_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3498..5387)
DNA (1890bp) protein (630aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=3 Tax=Lachnospiraceae RepID=A7B005_RUMGN
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
glucose-inhibited division protein A
L3_106_000M1_scaffold_6229_5
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5418..6800)
DNA (1383bp) protein (461aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
tRNA modification GTPase MnmE n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGX9_9FIRM
tRNA modification GTPase trmE
L3_106_000M1_scaffold_6229_6
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6929..8008)
DNA (1080bp) protein (360aa)
R3H domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LKJ7_9FIRM
R3H domain protein {ECO:0000313|EMBL:EET58896.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Predicted RNA-binding protein
L3_106_000M1_scaffold_6229_7
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(8023..9282)
DNA (1260bp) protein (420aa)
Membrane protein OxaA n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BMW8_9FIRM
Membrane protein OxaA {ECO:0000313|EMBL:CDA64475.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
L3_106_000M1_scaffold_6229_8
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9298..9495)
DNA (198bp) protein (66aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Roseburia sp. CAG:100 RepID=R7R936_9FIRM
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
hypothetical protein
Displaying 8 items

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