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L3_106_000M1_scaffold_996

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_996_1
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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141..1499
DNA (1359bp) protein (453aa)
Alpha amylase, catalytic domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LB21_9FIRM
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EET62152.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Glycosidases
L3_106_000M1_scaffold_996_2
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

1640..3595
DNA (1956bp) protein (652aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=2 Tax=root RepID=R6CF94_9FIRM
L3_106_000M1_scaffold_996_3
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3700..4785
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:52 RepID=R6GKA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB21671.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
transcriptional regulator CdaR
L3_106_000M1_scaffold_996_4
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5312..5824
DNA (513bp) protein (171aa)
Type IV leader peptidase family. (EC:3.4.23.43)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JR42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE65277.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
L3_106_000M1_scaffold_996_5
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5821..6837
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I6R7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32692.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L3_106_000M1_scaffold_996_6
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

6830..8053
DNA (1224bp) protein (408aa)
Pilus assembly protein CpaF n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BVL8_9FIRM
Pilus assembly protein CpaF {ECO:0000313|EMBL:CDA63196.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Flp pilus assembly protein, ATPase CpaF
L3_106_000M1_scaffold_996_7
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8086..8802
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LEV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET60692.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_106_000M1_scaffold_996_8
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8835..10154
DNA (1320bp) protein (440aa)
Bacterial type II secretion system domain protein F n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LEV2_9FIRM
Bacterial type II secretion system domain protein F {ECO:0000313|EMBL:EET60691.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_106_000M1_scaffold_996_9
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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10290..10457
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N7Z2_9FIRM
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR02520.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
hypothetical protein
L3_106_000M1_scaffold_996_10
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10454..12004
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LET6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET60675.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_106_000M1_scaffold_996_11
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12209..12961
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LET7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET60676.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_106_000M1_scaffold_996_12
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12994..13419
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Lachnobacterium bovis RepID=UPI0003B3A7D8
Uncharacterized protein {ECO:0000313|EMBL:CDE19629.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_106_000M1_scaffold_996_13
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13478..13990
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:237 RepID=R6LX88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB78552.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
hypothetical protein
L3_106_000M1_scaffold_996_14
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13987..15498
DNA (1512bp) protein (504aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003026984
FHA domain protein {ECO:0000313|EMBL:ERI89059.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
FOG: FHA domain
L3_106_000M1_scaffold_996_15
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(15525..16364)
DNA (840bp) protein (280aa)
Acetyltransferases n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BR40_9FIRM
Acetyltransferases {ECO:0000313|EMBL:CDA63439.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Acetyltransferases
L3_106_000M1_scaffold_996_16
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

16547..17158
DNA (612bp) protein (204aa)
Putative small hydrophobic molecule transporter protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BG00_9FIRM
Putative small hydrophobic molecule transporter protein {ECO:0000313|EMBL:CDA63208.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Uncharacterized membrane protein (homolog of Drosophila rhomboid)
L3_106_000M1_scaffold_996_17
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17287..17694
DNA (408bp) protein (136aa)
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LW41_9FIRM
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases {ECO:0000313|EMBL:CBL21844.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_106_000M1_scaffold_996_18
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

17727..18263
DNA (537bp) protein (179aa)
RNA polymerase sigma factor sigma-70 family n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BJ21_9FIRM
RNA polymerase sigma factor sigma-70 family {ECO:0000313|EMBL:CDA63205.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
RNA polymerase sigma factor, sigma-70 family
L3_106_000M1_scaffold_996_19
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18405..19469)
DNA (1065bp) protein (355aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LI36_9FIRM
L3_106_000M1_scaffold_996_20
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19703..21061
DNA (1359bp) protein (453aa)
Putative phage tail component domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LI37_9FIRM
Putative phage tail component domain protein {ECO:0000313|EMBL:EET59692.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
L3_106_000M1_scaffold_996_21
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

21124..21609
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6V8Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC93565.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
L3_106_000M1_scaffold_996_22
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

22662..24269
DNA (1608bp) protein (536aa)
Metallo-beta-lactamase family protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BVB2_9FIRM
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:CDA63061.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Predicted exonuclease of the beta-lactamase fold involved in RNA processing
L3_106_000M1_scaffold_996_23
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24419..25639
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C341_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG73391.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Transglutaminase-like superfamily.
L3_106_000M1_scaffold_996_24
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25755..27395
DNA (1641bp) protein (547aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LLL1_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EET58475.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
serine-type D-Ala-D-Ala carboxypeptidase
L3_106_000M1_scaffold_996_25
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27447..28184
DNA (738bp) protein (246aa)
Site-specific recombinase, phage integrase family n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LLL0_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EET58474.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Site-specific recombinase XerD
L3_106_000M1_scaffold_996_26
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28234..28743)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6L9M1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET62960.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_106_000M1_scaffold_996_27
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

29025..30323
DNA (1299bp) protein (433aa)
Trigger factor n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BYQ9_9FIRM
Trigger factor {ECO:0000256|RuleBase:RU003914}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
trigger factor
L3_106_000M1_scaffold_996_28
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30419..31309
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B9E7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84746.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
conserved hypothetical phospholipase
L3_106_000M1_scaffold_996_29
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

31281..32846
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RID6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32757.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_106_000M1_scaffold_996_30
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32899..33402)
DNA (504bp) protein (168aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CL29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22009.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
TetR family transcriptional regulator
Displaying items 1-30 of 49 in total

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