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L3_106_000M1_scaffold_7454

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_7454_1
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(129..611)
DNA (483bp) protein (161aa)
Transcription elongation factor GreA n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BWF6_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
transcription elongation factor GreA
L3_106_000M1_scaffold_7454_2
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(734..1687)
DNA (954bp) protein (318aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
tRNA-dihydrouridine synthase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RA93_9FIRM
tRNA-U20-dihydrouridine synthase
L3_106_000M1_scaffold_7454_3
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(1698..2033)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BGU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA63488.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
hypothetical protein
L3_106_000M1_scaffold_7454_4
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(2203..3183)
DNA (981bp) protein (327aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin-[acetyl-CoA-carboxylase] ligase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BRA4_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
L3_106_000M1_scaffold_7454_5
unknown

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comp(3254..3553)
DNA (300bp) protein (100aa)

This feature has no annotations

L3_106_000M1_scaffold_7454_6
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3540..4544)
DNA (1005bp) protein (335aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
Ornithine carbamoyltransferase n=1 Tax=Clostridium sp. CAG:230 RepID=R6DFN1_9CLOT
ornithine carbamoyltransferase
L3_106_000M1_scaffold_7454_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4578..5528)
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IHJ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59038.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Membrane protease subunits, stomatin/prohibitin homologs
L3_106_000M1_scaffold_7454_8
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5530..5973)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7EBJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE00269.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
Membrane protein implicated in regulation of membrane protease activity
L3_106_000M1_scaffold_7454_9
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6847..7365)
DNA (519bp) protein (173aa)
Nitroreductase n=1 Tax=Roseburia sp. CAG:182 RepID=R7QWP5_9FIRM
Diguanylate cyclase {ECO:0000313|EMBL:KHS56689.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
Nitroreductase
L3_106_000M1_scaffold_7454_10
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7434..7712)
DNA (279bp) protein (93aa)
Putative oxidoreductase of aldo/keto reductase family n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQR2_CLOSA
putative oxidoreductase of aldo/keto reductase family
Putative oxidoreductase of aldo/keto reductase family {ECO:0000313|EMBL:AGX42905.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Displaying 10 items

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