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L3_106_000M1_scaffold_258

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_258_1
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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278..1576
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WVS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08161.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
ProP; major facilitator superfamily permease
L3_106_000M1_scaffold_258_2
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1626..3572)
DNA (1947bp) protein (649aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WFH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08160.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
transcriptional antiterminator, BglG family
L3_106_000M1_scaffold_258_3
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3736..4380
DNA (645bp) protein (215aa)
ulaF2; L-ribulose-5-phosphate 4-epimerase UlaF (EC:5.1.3.4)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WMP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08159.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_258_4
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4417..5562
DNA (1146bp) protein (382aa)
alcohol dehydrogenase, class IV (EC:1.1.1.1)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WAR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08158.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_258_5
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5576..7543
DNA (1968bp) protein (656aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XPB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08157.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
nADH4; flavin oxidoreductase/NADH oxidase NADH
L3_106_000M1_scaffold_258_6
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7594..8643
DNA (1050bp) protein (350aa)
gyaR; glyoxylate reductase GyaR (EC:1.1.1.26)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WVR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08156.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_258_7
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8674..9849
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WFH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08155.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
cyanate permease
L3_106_000M1_scaffold_258_8
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10063..11109)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WMN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08154.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Oxidoreductase, zinc-binding dehydrogenase family protein
L3_106_000M1_scaffold_258_9
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11331..12890
DNA (1560bp) protein (520aa)
xylB3; D-xylulose kinase XylB (EC:2.7.1.-)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WAR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08153.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_258_10
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12981..14219
DNA (1239bp) protein (413aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Dorea sp. CAG:317 RepID=R6XPB3_9FIRM
L3_106_000M1_scaffold_258_11
unknown

Not on your lists

14365..14478
DNA (114bp) protein (38aa)

This feature has no annotations

L3_106_000M1_scaffold_258_12
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14417..15427
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WVR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08151.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_106_000M1_scaffold_258_13
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15443..16870
DNA (1428bp) protein (476aa)
deoxyguanosinetriphosphate triphosphohydrolase, putative (EC:3.1.5.1)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WFH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08150.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_258_14
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16934..17794
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WMN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08149.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_106_000M1_scaffold_258_15
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17807..18295
DNA (489bp) protein (163aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WAQ9_9FIRM
Cytosine/adenosine deaminases
L3_106_000M1_scaffold_258_16
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18630..20357
DNA (1728bp) protein (576aa)
Fe-S oxidoreductase (EC:4.-.-.-)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XPB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08147.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_258_17
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20440..20544
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WVR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08146.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_258_18
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20584..22101
DNA (1518bp) protein (506aa)
G5 domain protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WFG8_9FIRM
G5 domain protein {ECO:0000313|EMBL:CDD08145.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_106_000M1_scaffold_258_19
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22168..23412
DNA (1245bp) protein (415aa)
Purine catabolism regulatory protein-like family n=2 Tax=Coprococcus RepID=R6LNI4_9FIRM
Purine catabolism regulatory protein-like family {ECO:0000313|EMBL:CDB85094.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Purine catabolism regulatory protein-like family.
L3_106_000M1_scaffold_258_20
Peptoniphilus duerdenii, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23553..24380
DNA (828bp) protein (276aa)
Hydrolase, carbon-nitrogen family {ECO:0000313|EMBL:EFM24401.1}; EC=3.5.1.6 {ECO:0000313|EMBL:EFM24401.1};; TaxID=862517 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus duerdenii ATCC BAA-1640.;"
hypothetical protein n=1 Tax=Bacillus fordii RepID=UPI000381445F
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
L3_106_000M1_scaffold_258_21
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24399..25748
DNA (1350bp) protein (450aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FDQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05457.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Purine-cytosine permease-related protein
L3_106_000M1_scaffold_258_22
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25759..26694
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RRT6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC48019.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Protein of unknown function (DUF1177).
L3_106_000M1_scaffold_258_23
Pyrococcus horikoshii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

26696..27355
DNA (660bp) protein (220aa)
228aa long hypothetical hydantoin racemase n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58781_PYRHO
hydantoin racemase
228aa long hypothetical hydantoin racemase {ECO:0000313|EMBL:BAA30152.1}; TaxID=70601 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /; NBRC 100139 / OT-3).;"
L3_106_000M1_scaffold_258_24
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27521..28411
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBN5_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS07971.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L3_106_000M1_scaffold_258_25
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28497..28988
DNA (492bp) protein (164aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Predicted rRNA methylase (SpoU class) (EC:2.1.1.-)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Dorea sp. CAG:317 RepID=R6WAQ6_9FIRM
L3_106_000M1_scaffold_258_26
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29164..29472
DNA (309bp) protein (103aa)
Putative ATP synthase archaeal, H subunit n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBN1_CLOSV
Putative ATP synthase archaeal, H subunit {ECO:0000313|EMBL:EDS07967.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L3_106_000M1_scaffold_258_27
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29527..31548
DNA (2022bp) protein (674aa)
Archaeal/vacuolar-type H+-ATPase subunit I (EC:3.6.3.14)
V-type ATPase 116kDa subunit family protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XPA6_9FIRM
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_258_28
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31591..32076
DNA (486bp) protein (162aa)
ATP synthase subunit C. (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WVQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08141.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_258_29
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32093..32686
DNA (594bp) protein (198aa)
Archaeal/vacuolar-type H+-ATPase subunit E (EC:3.6.3.14)
V-type proton ATPase subunit E n=1 Tax=Dorea sp. CAG:317 RepID=R6WFG4_9FIRM
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_258_30
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32707..33675
DNA (969bp) protein (323aa)
Putative ATP synthase subunit C n=1 Tax=Dorea sp. CAG:317 RepID=R6WMM2_9FIRM
Putative ATP synthase subunit C {ECO:0000313|EMBL:CDD08139.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
Displaying items 1-30 of 102 in total

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