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L3_106_000M1_scaffold_1421

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_1421_1
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21..689)
DNA (669bp) protein (223aa)
DNA repair protein RecO n=1 Tax=Dorea sp. CAG:317 RepID=R6XLL5_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
DNA repair protein RecO
L3_106_000M1_scaffold_1421_2
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(637..807)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D9F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75444.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L3_106_000M1_scaffold_1421_3
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(861..1757)
DNA (897bp) protein (299aa)
GTPase Era n=1 Tax=Dorea sp. CAG:317 RepID=R6W805_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
GTP-binding protein Era
L3_106_000M1_scaffold_1421_4
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1813..4734)
DNA (2922bp) protein (974aa)
Peptidase M16 inactive domain protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WK27_9FIRM
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:CDD07239.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Predicted Zn-dependent peptidases, insulinase-like
L3_106_000M1_scaffold_1421_5
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4832..5419)
DNA (588bp) protein (196aa)
Acetyltransferase (isoleucine patch superfamily) (EC:2.3.1.79 2.3.1.18)
Maltose O-acetyltransferase n=1 Tax=Dorea sp. CAG:317 RepID=R6WCV4_9FIRM
Maltose O-acetyltransferase {ECO:0000313|EMBL:CDD07240.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_1421_6
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5467..6114)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WTC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07241.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_106_000M1_scaffold_1421_7
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6285..6641)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XLL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07242.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_106_000M1_scaffold_1421_8
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6692..7567)
DNA (876bp) protein (292aa)
p-loop ATPase MinD superfamily n=1 Tax=Dorea sp. CAG:317 RepID=R6W809_9FIRM
p-loop ATPase MinD superfamily {ECO:0000313|EMBL:CDD07243.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
cobyrinic acid ac-diamide synthase
L3_106_000M1_scaffold_1421_9
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7564..8400)
DNA (837bp) protein (279aa)
4Fe-4S binding domain protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WK31_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDD07244.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_106_000M1_scaffold_1421_10
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8400..9128)
DNA (729bp) protein (243aa)
Protein belonging to Uncharacterized protein family UPF0251 n=1 Tax=Dorea sp. CAG:317 RepID=R6WCV9_9FIRM
Protein belonging to Uncharacterized protein family UPF0251 {ECO:0000313|EMBL:CDD07245.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Predicted DNA-binding proteins
L3_106_000M1_scaffold_1421_11
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9284..9733)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WTC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07246.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Putative phage regulator/repressor protein
L3_106_000M1_scaffold_1421_12
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9853..10056)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XLM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07247.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_1421_13
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10273..10743)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000379ADCB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM67664.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_106_000M1_scaffold_1421_14
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10899..11723)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HN40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29559.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_106_000M1_scaffold_1421_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12026..12781)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77888.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_106_000M1_scaffold_1421_16
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12815..14083)
DNA (1269bp) protein (423aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JPT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36233.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_106_000M1_scaffold_1421_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14130..14549)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZE07_9CLOT
Transcriptional regulator MerR family {ECO:0000313|EMBL:CCZ77887.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_106_000M1_scaffold_1421_18
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15245..17674)
DNA (2430bp) protein (810aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Dorea sp. CAG:317 RepID=R6W813_9FIRM
L3_106_000M1_scaffold_1421_19
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18188..18610
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WK34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07249.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_106_000M1_scaffold_1421_20
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18673..19854
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WCW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07250.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
L3_106_000M1_scaffold_1421_21
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19903..20835)
DNA (933bp) protein (311aa)
Transporter auxin efflux carrier (AEC) family protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WK37_9FIRM
Transporter auxin efflux carrier (AEC) family protein {ECO:0000313|EMBL:CDD07254.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Predicted permeases
L3_106_000M1_scaffold_1421_22
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20835..22529)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WCW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07255.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_106_000M1_scaffold_1421_23
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22553..23011)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WTD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07256.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Trk-type K+ transport systems, membrane components
L3_106_000M1_scaffold_1421_24
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23008..23988)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WTD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07256.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Trk-type K+ transport systems, membrane components
L3_106_000M1_scaffold_1421_25
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24000..25358)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XLN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07257.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
K+ transport systems, NAD-binding component
L3_106_000M1_scaffold_1421_26
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25517..27586)
DNA (2070bp) protein (690aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6W822_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07258.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_1421_27
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27846..28940
DNA (1095bp) protein (365aa)
Prephenate dehydrogenase (EC:1.3.1.12)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WCX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07260.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_1421_28
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28930..30231
DNA (1302bp) protein (434aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Dorea sp. CAG:317 RepID=R6WTE3_9FIRM
L3_106_000M1_scaffold_1421_29
unknown

Not on your lists

comp(30189..30374)
DNA (186bp) protein (62aa)

This feature has no annotations

L3_106_000M1_scaffold_1421_30
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30325..30801)
DNA (477bp) protein (159aa)
Superoxide dismutase [Cu-Zn] n=1 Tax=Dorea sp. CAG:317 RepID=R6XLN7_9FIRM
Superoxide dismutase [Cu-Zn] {ECO:0000313|EMBL:CDD07262.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Cu/Zn superoxide dismutase
Displaying items 1-30 of 43 in total

View Taxonomy