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L3_106_000M1_scaffold_2284

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_2284_1
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

308..1666
DNA (1359bp) protein (453aa)
MATE efflux family protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XNL1_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDD07887.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
MATE efflux family protein
L3_106_000M1_scaffold_2284_2
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1653..2960
DNA (1308bp) protein (436aa)
Alpha amylase catalytic domain protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WV15_9FIRM
Alpha amylase catalytic domain protein {ECO:0000313|EMBL:CDD07886.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Glycosidases
L3_106_000M1_scaffold_2284_3
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3011..3523)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WEN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07885.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
L3_106_000M1_scaffold_2284_4
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3544..4374)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WLR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07884.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_106_000M1_scaffold_2284_5
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4378..5274)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6W9X8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07883.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_2284_6
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5290..6513)
DNA (1224bp) protein (408aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Dorea sp. CAG:317 RepID=R6XNK5_9FIRM
L3_106_000M1_scaffold_2284_7
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7031..7735)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WV09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07881.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_106_000M1_scaffold_2284_8
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7778..8719)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WEN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07880.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_106_000M1_scaffold_2284_9
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8766..9821)
DNA (1056bp) protein (352aa)
CobW/P47K family protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WLQ6_9FIRM
CobW/P47K family protein {ECO:0000313|EMBL:CDD07879.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Putative GTPases (G3E family)
L3_106_000M1_scaffold_2284_10
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9987..11969)
DNA (1983bp) protein (661aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
vacuolar-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Dorea sp. CAG:317 RepID=R6W9X4_9FIRM
L3_106_000M1_scaffold_2284_11
unknown

Not on your lists

comp(12079..12183)
DNA (105bp) protein (35aa)

This feature has no annotations

L3_106_000M1_scaffold_2284_12
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12125..12886)
DNA (762bp) protein (254aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Dorea sp. CAG:317 RepID=R6XNJ7_9FIRM
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:CDD07877.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
(R)-hydroxyglutaryl-CoA dehydratase activator
L3_106_000M1_scaffold_2284_13
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12902..13162)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WV03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07876.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_106_000M1_scaffold_2284_14
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13225..14499)
DNA (1275bp) protein (425aa)
2-hydroxyglutaryl-CoA dehydratase D-component n=1 Tax=Dorea sp. CAG:317 RepID=R6WEM4_9FIRM
2-hydroxyglutaryl-CoA dehydratase D-component {ECO:0000313|EMBL:CDD07875.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_106_000M1_scaffold_2284_15
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14640..15794)
DNA (1155bp) protein (385aa)
Cysteine desulfurase n=1 Tax=Dorea sp. CAG:317 RepID=R6WLQ2_9FIRM
Cysteine desulfurase {ECO:0000313|EMBL:CDD07874.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_106_000M1_scaffold_2284_16
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15772..16527)
DNA (756bp) protein (252aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Dorea sp. CAG:317 RepID=R6W9X0_9FIRM
L3_106_000M1_scaffold_2284_17
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16527..17351)
DNA (825bp) protein (275aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Dorea sp. CAG:317 RepID=R6XNJ2_9FIRM
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
ABC-type cobalt transport system, permease component CbiQ and related transporters
L3_106_000M1_scaffold_2284_18
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17348..18202)
DNA (855bp) protein (285aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
ABC transporter ATP-binding protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WUZ7_9FIRM
ABC-type cobalt transport system, ATPase component
L3_106_000M1_scaffold_2284_19
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18187..19038)
DNA (852bp) protein (284aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WEL8_9FIRM
ABC-type cobalt transport system, ATPase component
L3_106_000M1_scaffold_2284_20
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19086..19607)
DNA (522bp) protein (174aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dorea sp. CAG:317 RepID=R6WLP5_9FIRM
L3_106_000M1_scaffold_2284_21
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19714..19998)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WJS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07104.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_106_000M1_scaffold_2284_22
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20057..20734)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XQK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08587.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
ABC transporter
L3_106_000M1_scaffold_2284_23
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20759..23284)
DNA (2526bp) protein (842aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WBY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08588.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
ABC transporter permease
L3_106_000M1_scaffold_2284_24
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23299..24624)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AKW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ25024.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_106_000M1_scaffold_2284_25
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24621..25349)
DNA (729bp) protein (243aa)
Response regulator receiver domain protein n=2 Tax=Dorea RepID=A6BDY4_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDE19030.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Response regulator of the LytR/AlgR family
L3_106_000M1_scaffold_2284_26
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25559..26353)
DNA (795bp) protein (265aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Dorea sp. CAG:317 RepID=R6WT08_9FIRM
L3_106_000M1_scaffold_2284_27
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26553..27197
DNA (645bp) protein (215aa)
Transcriptional regulator GntR family n=1 Tax=Dorea sp. CAG:317 RepID=R6WCJ2_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDD07100.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
Displaying 27 items

View Taxonomy