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L3_106_000M1_scaffold_3691

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_3691_1
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(309..1226)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XKK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06887.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Colicin V production protein.
L3_106_000M1_scaffold_3691_2
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1240..2493)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6W6Z7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06888.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_106_000M1_scaffold_3691_3
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2578..3681)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WJ54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06889.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
LysM domain.
L3_106_000M1_scaffold_3691_4
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3868..4806)
DNA (939bp) protein (313aa)
Transketolase, C-terminal subunit (EC:2.2.1.1)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WBX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06890.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_3691_5
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4794..5630)
DNA (837bp) protein (279aa)
Transketolase, N-terminal subunit (EC:2.2.1.1)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WSF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06891.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_3691_6
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5728..6381)
DNA (654bp) protein (218aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
transaldolase, putative, TalC family (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Dorea sp. CAG:317 RepID=R6XKL8_9FIRM
L3_106_000M1_scaffold_3691_7
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6628..7725)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WJ58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06894.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
putative transcriptional regulator
L3_106_000M1_scaffold_3691_8
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7745..8341)
DNA (597bp) protein (199aa)
Recombination protein RecR n=3 Tax=Dorea RepID=B0G9F2_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
recombination protein RecR
L3_106_000M1_scaffold_3691_9
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8400..8753)
DNA (354bp) protein (118aa)
Nucleoid-associated protein BN605_00373 n=1 Tax=Dorea sp. CAG:317 RepID=R6WSG3_9FIRM
Nucleoid-associated protein BN605_00373 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
conserved hypothetical protein TIGR00103
L3_106_000M1_scaffold_3691_10
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8817..10394)
DNA (1578bp) protein (526aa)
DNA polymerase III, subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunit gamma and tau n=1 Tax=Dorea sp. CAG:317 RepID=R6XKM6_9FIRM
DNA polymerase III subunit gamma and tau {ECO:0000313|EMBL:CDD06897.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_3691_11
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10429..11505)
DNA (1077bp) protein (359aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Dorea sp. CAG:317 RepID=R6W706_9FIRM
6-phosphofructokinase 1 {ECO:0000313|EMBL:CDD06898.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_3691_12
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11917..12726
DNA (810bp) protein (270aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Dorea sp. CAG:317 RepID=R6WJ61_9FIRM
L3_106_000M1_scaffold_3691_13
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12861..13103
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WBZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06900.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_106_000M1_scaffold_3691_14
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13364..13867)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WSG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06901.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_3691_15
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13944..14834)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XKN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06902.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_106_000M1_scaffold_3691_16
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14943..16007
DNA (1065bp) protein (355aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Dorea sp. CAG:317 RepID=R6W712_9FIRM
L3_106_000M1_scaffold_3691_17
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16061..16609)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WJ66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06904.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
RNA polymerase sigma factor, sigma-70 family
L3_106_000M1_scaffold_3691_18
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16648..17052)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WBZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06905.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Displaying 18 items

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