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L3_106_000M1_scaffold_206

Search features with annotation key words

Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_206_1
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..2926)
DNA (2925bp) protein (975aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P910_9FIRM
DNA-directed RNA polymerase subunit beta
L3_106_000M1_scaffold_206_2
unknown

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comp(3266..3559)
DNA (294bp) protein (98aa)

This feature has no annotations

L3_106_000M1_scaffold_206_3
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3619..5022)
DNA (1404bp) protein (468aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P907_9FIRM
L3_106_000M1_scaffold_206_4
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5145..5717)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9MAZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65042.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Lytic transglycosylase catalytic
L3_106_000M1_scaffold_206_5
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5747..6409)
DNA (663bp) protein (221aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Clostridium sp. CAG:242 RepID=R6CYR1_9CLOT
L3_106_000M1_scaffold_206_6
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6428..7462)
DNA (1035bp) protein (345aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family n=1 Tax=Clostridium sp. MSTE9 RepID=J1HA80_9CLOT
ywlC; putative tRNA threonylcarbamoyladenosine biosynthesis protein YwlC
L3_106_000M1_scaffold_206_7
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7465..8541)
DNA (1077bp) protein (359aa)
Peptide chain release factor 1 n=1 Tax=Clostridium sp. CAG:169 RepID=R6BVQ2_9CLOT
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
prfA; Peptide chain release factor 1
L3_106_000M1_scaffold_206_8
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8545..8790)
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VZ88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO59866.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L3_106_000M1_scaffold_206_9
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9011..9643)
DNA (633bp) protein (211aa)
TrkA-C domain protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JHZ7_CELLD
TrkA-C domain-containing protein
TrkA-C domain protein {ECO:0000313|EMBL:ADZ81941.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_106_000M1_scaffold_206_10
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9680..10087)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AYM5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB53632.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
L3_106_000M1_scaffold_206_11
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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10374..11594
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35084.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
GCN5-related N-acetyltransferase
L3_106_000M1_scaffold_206_12
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11645..12109)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AAD9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX38854.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
flavodoxin
L3_106_000M1_scaffold_206_13
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12125..13483)
DNA (1359bp) protein (453aa)
Phospholipase patatin family n=1 Tax=Clostridium sp. CAG:242 RepID=R6DMS3_9CLOT
Phospholipase patatin family {ECO:0000313|EMBL:CDA79187.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
Predicted esterase of the alpha-beta hydrolase superfamily
L3_106_000M1_scaffold_206_14
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13555..14562)
DNA (1008bp) protein (336aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G4P6_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CDE22120.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
D-alanyl-D-alanine carboxypeptidase
L3_106_000M1_scaffold_206_15
unknown

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14847..15035
DNA (189bp) protein (63aa)

This feature has no annotations

L3_106_000M1_scaffold_206_16
unknown

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15050..15406
DNA (357bp) protein (119aa)

This feature has no annotations

L3_106_000M1_scaffold_206_17
unknown

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15431..15679
DNA (249bp) protein (83aa)

This feature has no annotations

L3_106_000M1_scaffold_206_18
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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15741..16076
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R283_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35290.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_106_000M1_scaffold_206_19
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16135..16776)
DNA (642bp) protein (214aa)
Galactoside O-acetyltransferase (EC:2.3.1.18)
Probable sugar O-acetyltransferase (Thiogalactoside acetyltransferase) n=1 Tax=Clostridium sp. CAG:505 RepID=R7B7E5_9CLOT
Probable sugar O-acetyltransferase (Thiogalactoside acetyltransferase) {ECO:0000313|EMBL:CDD60959.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_106_000M1_scaffold_206_20
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16816..17412)
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RN47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75971.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_106_000M1_scaffold_206_21
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17440..18300)
DNA (861bp) protein (287aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
Putative pyridoxal kinase n=1 Tax=Clostridium sp. CAG:169 RepID=R6CBC4_9CLOT
hypothetical protein
L3_106_000M1_scaffold_206_22
unknown

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18630..18863
DNA (234bp) protein (78aa)

This feature has no annotations

L3_106_000M1_scaffold_206_23
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18934..20316)
DNA (1383bp) protein (461aa)
Potassium uptake protein TrkH family n=1 Tax=Clostridium sp. CAG:242 RepID=R6D3L9_9CLOT
Potassium uptake protein TrkH family {ECO:0000313|EMBL:CDA79589.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
TrkH family potassium uptake protein
L3_106_000M1_scaffold_206_24
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20321..20806)
DNA (486bp) protein (162aa)
Hydrolase, NUDIX family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P973_9FIRM
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDS11942.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
NUDIX hydrolase
L3_106_000M1_scaffold_206_25
unknown

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comp(21112..21240)
DNA (129bp) protein (43aa)

This feature has no annotations

L3_106_000M1_scaffold_206_26
unknown

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comp(21240..21656)
DNA (417bp) protein (139aa)
UPI0002DF0E87 related cluster n=1 Tax=unknown RepID=UPI0002DF0E87
L3_106_000M1_scaffold_206_27
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21640..22314)
DNA (675bp) protein (225aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; Flags: Precursor;; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
UPI0002F52572 related cluster n=1 Tax=unknown RepID=UPI0002F52572
antimicrobial peptide ABC transporter ATPase
L3_106_000M1_scaffold_206_28
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22307..23569)
DNA (1263bp) protein (421aa)
UPI0002DF4FF6 related cluster n=1 Tax=unknown RepID=UPI0002DF4FF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE95841.1}; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L3_106_000M1_scaffold_206_29
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23570..24100)
DNA (531bp) protein (177aa)
UPI0003B6EF0E related cluster n=1 Tax=unknown RepID=UPI0003B6EF0E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE95840.1}; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L3_106_000M1_scaffold_206_30
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(24212..24880)
DNA (669bp) protein (223aa)
UPI0002E41ACB related cluster n=1 Tax=unknown RepID=UPI0002E41ACB
Uncharacterized protein {ECO:0000313|EMBL:CDC29910.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
Displaying items 1-30 of 133 in total

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