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L3_106_000M1_scaffold_3769

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_3769_1
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..318
DNA (318bp) protein (106aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
deoD; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Clostridium sp. CAG:349 RepID=R6XWN1_9CLOT
L3_106_000M1_scaffold_3769_2
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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331..1509
DNA (1179bp) protein (393aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Clostridium sp. MSTE9 RepID=J0N825_9CLOT
L3_106_000M1_scaffold_3769_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1591..2004
DNA (414bp) protein (138aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBM9_9FIRM
Cytidine deaminase {ECO:0000313|EMBL:CCZ78147.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_106_000M1_scaffold_3769_4
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2218..3282
DNA (1065bp) protein (355aa)
Putative ABC-type transport system, periplasmic component/surface lipoprotein n=1 Tax=Clostridium sp. BNL1100 RepID=H2JBM8_9CLOT
putative ABC-type transport system, periplasmic component/surface lipoprotein
Putative ABC-type transport system, periplasmic component/surface lipoprotein {ECO:0000313|EMBL:AEY67174.1}; Flags: Precursor;; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
L3_106_000M1_scaffold_3769_5
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3380..3988
DNA (609bp) protein (203aa)
haloacid dehalogenase n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B68962
HAD-superfamily hydrolase, subfamily IA, variant 3
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:CDM69358.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_106_000M1_scaffold_3769_6
unknown

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comp(4054..4785)
DNA (732bp) protein (244aa)

This feature has no annotations

L3_106_000M1_scaffold_3769_7
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4893..5531)
DNA (639bp) protein (213aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
udk; uridine kinase Udk (EC:2.7.1.48)
Uridine kinase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M0R8_9CLOT
L3_106_000M1_scaffold_3769_8
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5861..7954
DNA (2094bp) protein (698aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Clostridium sp. CAG:242 RepID=R6CH01_9CLOT
L3_106_000M1_scaffold_3769_9
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8102..8806
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YDJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24965.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L3_106_000M1_scaffold_3769_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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8823..10052
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9V9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD01415.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L3_106_000M1_scaffold_3769_11
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10065..11126
DNA (1062bp) protein (354aa)
TFIIB zinc-binding protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PK55_9FIRM
TFIIB zinc-binding protein {ECO:0000313|EMBL:ERK44139.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_106_000M1_scaffold_3769_12
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11123..11953
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7ABB0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD58068.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_106_000M1_scaffold_3769_13
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12275..12976)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTH5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO61471.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L3_106_000M1_scaffold_3769_14
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(12957..13295)
DNA (339bp) protein (113aa)
Transcriptional regulator, XRE n=2 Tax=Bacillus cereus RepID=C2Z4G5_BACCE
Bacillus thuringiensis serovar morrisoni strain HD 600 BG10.Contig244, whole genome shotgun sequence {ECO:0000313|EMBL:KIP23143.1}; TaxID=1441 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis subsp. morrisoni.;"
transcriptional regulator
L3_106_000M1_scaffold_3769_15
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13381..14100)
DNA (720bp) protein (240aa)
SNARE-like domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHC3_9FIRM
SNARE-like domain protein {ECO:0000313|EMBL:EDS08891.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_106_000M1_scaffold_3769_16
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14257..14853
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PBH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS11509.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_106_000M1_scaffold_3769_17
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14953..16410
DNA (1458bp) protein (486aa)
MATE efflux family protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BDJ7_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:CDA61300.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
MATE efflux family protein
Displaying 17 items

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