ggKbase home page

L3_106_000M1_scaffold_220

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_220_1
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(214..780)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036800C0
Uncharacterized protein {ECO:0000313|EMBL:KIO45990.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
peroxiredoxin
L3_106_000M1_scaffold_220_2
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

839..2671
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00035E5CD3
Uncharacterized protein {ECO:0000313|EMBL:KIO44015.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
hypothetical protein
L3_106_000M1_scaffold_220_3
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2757..4088
DNA (1332bp) protein (444aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter laneus CAG:561.;"
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI000375E0C8
tRNA(Ile)-lysidine synthase
L3_106_000M1_scaffold_220_4
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4379..5383
DNA (1005bp) protein (335aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160, ECO:0000313|EMBL:KIO44014.1}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Butyricimonas synergistica RepID=UPI0003646DB0
L3_106_000M1_scaffold_220_5
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5430..6236
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003737B64
Patatin {ECO:0000313|EMBL:KIO44013.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
Patatin
L3_106_000M1_scaffold_220_6
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6468..7769
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI000373C319
Helicase {ECO:0000313|EMBL:KIO44012.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
dbpA; ATP-independent RNA helicase
L3_106_000M1_scaffold_220_7
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7824..8597)
DNA (774bp) protein (258aa)
Inositol-phosphate phosphatase (EC:3.1.3.25)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003752E8F
Inositol monophosphatase {ECO:0000313|EMBL:KIO44011.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
L3_106_000M1_scaffold_220_8
unknown

Not on your lists

comp(8607..9611)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037C6C81
L3_106_000M1_scaffold_220_9
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9644..10690)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037CC6E7
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
L3_106_000M1_scaffold_220_10
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10695..11540)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036C4B7A
Histidinol phosphatase {ECO:0000313|EMBL:KIO44008.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
histidinol phosphate phosphatase HisJ family
L3_106_000M1_scaffold_220_11
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11544..12047)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036AE51A
Flavin reductase {ECO:0000313|EMBL:KIO44007.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
hypothetical protein
L3_106_000M1_scaffold_220_12
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(12109..13896)
DNA (1788bp) protein (596aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
arginyl-tRNA synthetase n=1 Tax=Butyricimonas synergistica RepID=UPI00037755A0
L3_106_000M1_scaffold_220_13
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14109..15371)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI000368A830
Transporter {ECO:0000313|EMBL:KIO44004.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
outer membrane efflux protein
L3_106_000M1_scaffold_220_14
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15448..18483)
DNA (3036bp) protein (1012aa)
multidrug transporter AcrB n=1 Tax=Butyricimonas synergistica RepID=UPI0003627B4E
Multidrug transporter AcrB {ECO:0000313|EMBL:KIO44003.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
acriflavin resistance protein
L3_106_000M1_scaffold_220_15
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18493..19542)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00035D730B
Hemolysin D {ECO:0000313|EMBL:KIO44002.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
efflux transporter, RND family, MFP subunit
L3_106_000M1_scaffold_220_16
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19818..20594)
DNA (777bp) protein (259aa)
DNA polymerase III subunit epsilon n=1 Tax=Butyricimonas synergistica RepID=UPI000371B835
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KIO44001.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
Exonuclease RNase T and DNA polymerase III
L3_106_000M1_scaffold_220_17
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20766..21890)
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Butyricimonas synergistica RepID=UPI0003776DEC
L3_106_000M1_scaffold_220_18
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21909..23300)
DNA (1392bp) protein (464aa)
Xaa-Pro aminopeptidase n=1 Tax=Butyricimonas synergistica RepID=UPI000376ED24
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:KIO43999.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
peptidase M24
L3_106_000M1_scaffold_220_19
Bacteroides intestinalis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23944..25101
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036DC6E4
Uncharacterized protein {ECO:0000313|EMBL:EDV03836.1}; TaxID=471870 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides intestinalis DSM 17393.;"
anti-FecI sigma factor, FecR
L3_106_000M1_scaffold_220_20
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25273..28878
DNA (3606bp) protein (1202aa)
TonB-dependent receptor plug n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9Z3A3_ODOSD
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADY33552.1}; Flags: Precursor;; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_106_000M1_scaffold_220_21
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28891..30528
DNA (1638bp) protein (546aa)
RagB/SusD domain-containing protein n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9Z3A4_ODOSD
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:ADY33553.1}; Flags: Precursor;; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_106_000M1_scaffold_220_22
Bacteroides sp. CAG:754, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30542..31462
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036A35AE
Uncharacterized protein {ECO:0000313|EMBL:CDA83809.1}; TaxID=1262750 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:754.;"
hypothetical protein
L3_106_000M1_scaffold_220_23
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31469..32188
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Prevotella paludivivens RepID=UPI00037779F1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY33555.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_106_000M1_scaffold_220_24
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32346..33455
DNA (1110bp) protein (370aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9Z3A8_ODOSD
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ADY33557.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_106_000M1_scaffold_220_25
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33469..34716
DNA (1248bp) protein (416aa)
Thioredoxin domain-containing protein n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9Z3B2_ODOSD
thioredoxin
Thioredoxin domain-containing protein {ECO:0000313|EMBL:ADY33561.1}; Flags: Precursor;; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_106_000M1_scaffold_220_26
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34979..36223
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036BF1E7
Major facilitator transporter {ECO:0000313|EMBL:KIO46006.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
glucose/galactose transporter
L3_106_000M1_scaffold_220_27
unknown

Not on your lists

36337..36579
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI000370F12C
L3_106_000M1_scaffold_220_28
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36611..37189)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036B0E3D
Uncharacterized protein {ECO:0000313|EMBL:KIO42569.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
hypothetical protein
L3_106_000M1_scaffold_220_29
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37277..38644)
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003778EFB
4Fe-4S ferredoxin {ECO:0000313|EMBL:KIO42570.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
electron transport protein
L3_106_000M1_scaffold_220_30
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38715..39452)
DNA (738bp) protein (246aa)
Fe-S oxidoreductase n=1 Tax=Butyricimonas synergistica RepID=UPI00036C8639
Fe-S oxidoreductase {ECO:0000313|EMBL:KIO42571.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
oxidoreductase glycolate oxidase
Displaying items 1-30 of 95 in total

View Taxonomy