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L3_106_000M1_scaffold_48

Search features with annotation key words

Displaying items 1-30 of 271 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_48_1
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..987
DNA (987bp) protein (329aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5ZAM4_9FIRM
L3_106_000M1_scaffold_48_2
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1246..1608
DNA (363bp) protein (121aa)
Lactoylglutathione lyase and related lyases n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FH31_9FIRM
Lactoylglutathione lyase and related lyases {ECO:0000313|EMBL:CDB12493.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
Lactoylglutathione lyase and related lyases
L3_106_000M1_scaffold_48_3
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1656..2183
DNA (528bp) protein (176aa)
Nitroreductase family protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FSR6_9FIRM
Nitroreductase family protein {ECO:0000313|EMBL:CDB12494.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
Nitroreductase
L3_106_000M1_scaffold_48_4
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2193..2966
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:156 RepID=R5YYN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA29649.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
ABC transporter-like protein
L3_106_000M1_scaffold_48_5
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2966..4147
DNA (1182bp) protein (394aa)
ABC-2 type transporter n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FU64_9FIRM
ABC-2 type transporter {ECO:0000313|EMBL:CDB12496.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
ABC transporter
L3_106_000M1_scaffold_48_6
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4134..5282
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:156 RepID=R5Z6A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA29651.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
ABC-2 type transporter
L3_106_000M1_scaffold_48_7
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5317..5607
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FH51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB12498.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
L3_106_000M1_scaffold_48_8
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5708..7036)
DNA (1329bp) protein (443aa)
MATE efflux family protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FSU7_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDB12499.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
putative efflux protein, MATE family
L3_106_000M1_scaffold_48_9
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7305..7874
DNA (570bp) protein (190aa)
Sigma-70 region 2 n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FKE3_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:CDB12500.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
putative RNA polymerase sigma factor 70
L3_106_000M1_scaffold_48_10
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7888..8916
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FU74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB12501.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
L3_106_000M1_scaffold_48_11
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8927..9832)
DNA (906bp) protein (302aa)
Radical SAM protein, TIGR01212 family n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5ZAM7_9FIRM
Radical SAM protein, TIGR01212 family {ECO:0000313|EMBL:EDM50128.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
radical SAM protein
L3_106_000M1_scaffold_48_12
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10370..11635
DNA (1266bp) protein (422aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FXC9_9FIRM
3-isopropylmalate dehydratase, large subunit
L3_106_000M1_scaffold_48_13
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11646..12131
DNA (486bp) protein (162aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
leuD; 3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FPL7_9FIRM
L3_106_000M1_scaffold_48_14
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12148..13638
DNA (1491bp) protein (497aa)
threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KU86_9FIRM
Threonine synthase {ECO:0000313|EMBL:CCY68644.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
L3_106_000M1_scaffold_48_15
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13823..14398
DNA (576bp) protein (192aa)
metal dependent phosphohydrolase (EC:3.1.3.5)
HD domain protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6GIF7_9FIRM
HD domain protein {ECO:0000313|EMBL:CDB13987.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
L3_106_000M1_scaffold_48_16
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14419..16554
DNA (2136bp) protein (712aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
Topoisomerase IA (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KPC0_9FIRM
L3_106_000M1_scaffold_48_17
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16554..18374
DNA (1821bp) protein (607aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FXD7_9FIRM
glucosamine--fructose-6-phosphate aminotransferase
L3_106_000M1_scaffold_48_18
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18680..19339
DNA (660bp) protein (220aa)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FPM2_9FIRM
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:CDB13990.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
putative UDP-N-acetylglucosamine diphosphorylase
L3_106_000M1_scaffold_48_19
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19820..21181
DNA (1362bp) protein (454aa)
SpoIID/LytB domain protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FY89_9FIRM
SpoIID/LytB domain protein {ECO:0000313|EMBL:CDB13991.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
SpoIID/LytB domain-containing protein
L3_106_000M1_scaffold_48_20
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21288..22142)
DNA (855bp) protein (285aa)
YihY family protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5L5N6_9FIRM
YihY family protein {ECO:0000313|EMBL:CCY68606.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
ribonuclease BN
L3_106_000M1_scaffold_48_21
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23087..24106
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Eubacterium sp. CAG:192 RepID=R6GEY2_9FIRM
L3_106_000M1_scaffold_48_22
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24125..26542
DNA (2418bp) protein (806aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KU43_9FIRM
L3_106_000M1_scaffold_48_23
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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26744..27325
DNA (582bp) protein (194aa)
Toxin-antitoxin system antitoxin component Xre family n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6FF78_9FIRM
Toxin-antitoxin system antitoxin component Xre family {ECO:0000313|EMBL:CDB00727.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L3_106_000M1_scaffold_48_24
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27315..28028
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:632 RepID=R5K3S6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY59739.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
hypothetical protein
L3_106_000M1_scaffold_48_25
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28120..28566
DNA (447bp) protein (149aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160974}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160970};; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Eubacterium sp. CAG:192 RepID=R6GHA6_9FIRM
L3_106_000M1_scaffold_48_26
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28673..29734
DNA (1062bp) protein (354aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z6U2_9FIRM
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase
L3_106_000M1_scaffold_48_27
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29762..30178
DNA (417bp) protein (139aa)
NUDIX hydrolase n=1 Tax=Eubacterium sp. CAG:156 RepID=R5ZL16_9FIRM
NUDIX hydrolase {ECO:0000313|EMBL:CDA29537.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
NUDIX hydrolase
L3_106_000M1_scaffold_48_28
unknown

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comp(30153..30431)
DNA (279bp) protein (93aa)

This feature has no annotations

L3_106_000M1_scaffold_48_29
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30450..31727
DNA (1278bp) protein (426aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240533};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z6U1_9FIRM
L3_106_000M1_scaffold_48_30
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31993..32952
DNA (960bp) protein (320aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
ketopantoate reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FH69_9FIRM
Displaying items 1-30 of 271 in total

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