ggKbase home page

L3_106_000M1_scaffold_1020

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_1020_1
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

165..341
DNA (177bp) protein (59aa)
Uncharacterized protein n=13 Tax=Firmicutes RepID=E2SHM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05226.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
putative conjugative transposon protein
L3_106_000M1_scaffold_1020_2
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

611..1747
DNA (1137bp) protein (379aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=2 Tax=root RepID=A5Z3W6_9FIRM
L3_106_000M1_scaffold_1020_3
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1790..2092
DNA (303bp) protein (101aa)
Preprotein translocase YajC subunit n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FKM6_9FIRM
Preprotein translocase YajC subunit {ECO:0000313|EMBL:CDB12580.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
preprotein translocase subunit YajC
L3_106_000M1_scaffold_1020_4
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

2288..5647
DNA (3360bp) protein (1120aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6UZS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC76027.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
Fibro-slime
L3_106_000M1_scaffold_1020_5
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5847..6929
DNA (1083bp) protein (361aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FT27_9FIRM
L3_106_000M1_scaffold_1020_6
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6960..8627
DNA (1668bp) protein (556aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FHB3_9FIRM
L3_106_000M1_scaffold_1020_7
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8646..10337
DNA (1692bp) protein (564aa)
Acetolactate synthase large subunit biosynthetic type n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KZZ1_9FIRM
Acetolactate synthase large subunit biosynthetic type {ECO:0000313|EMBL:CCY70674.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
acetolactate synthase
L3_106_000M1_scaffold_1020_8
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10442..11524
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
serC; phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FUC5_9FIRM
L3_106_000M1_scaffold_1020_9
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11610..12773
DNA (1164bp) protein (388aa)
4-phosphoerythronate dehydrogenase n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FKM1_9FIRM
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:CDB12575.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit
L3_106_000M1_scaffold_1020_10
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12888..13799
DNA (912bp) protein (304aa)
Transporter small conductance mechanosensitive ion channel MscS family protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FT24_9FIRM
Transporter small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:CDB12574.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
MscS family small conductance mechanosensitive ion channel
L3_106_000M1_scaffold_1020_11
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13918..14328
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FHA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB12573.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
hypothetical protein
L3_106_000M1_scaffold_1020_12
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14309..15472
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6GE76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB12572.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
hypothetical protein
L3_106_000M1_scaffold_1020_13
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15507..16784
DNA (1278bp) protein (426aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FUC2_9FIRM
L3_106_000M1_scaffold_1020_14
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17101..18474)
DNA (1374bp) protein (458aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FKL2_9FIRM
L3_106_000M1_scaffold_1020_15
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18752..19681
DNA (930bp) protein (310aa)
tRNA-dihydrouridine synthase n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FJ92_9FIRM
tRNA-dihydrouridine synthase {ECO:0000313|EMBL:CDB13318.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
dihydrouridine synthase
L3_106_000M1_scaffold_1020_16
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19940..21928)
DNA (1989bp) protein (663aa)
Hsp90 protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FV72_9FIRM
Hsp90 protein {ECO:0000313|EMBL:CDB13319.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
heat shock protein 90
L3_106_000M1_scaffold_1020_17
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22141..22632)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FMS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB13320.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
hypothetical protein
L3_106_000M1_scaffold_1020_18
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22892..23380
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6GGF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB13322.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
L3_106_000M1_scaffold_1020_19
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23423..24517
DNA (1095bp) protein (365aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FJ96_9FIRM
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:CDB13323.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
L3_106_000M1_scaffold_1020_20
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25049..25741
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52379.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
NifU homolog involved in Fe-S cluster formation
L3_106_000M1_scaffold_1020_21
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25754..26764
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52380.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_106_000M1_scaffold_1020_22
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27026..28489
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FUZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB13239.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
internalin-like protein
L3_106_000M1_scaffold_1020_23
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28774..28965
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8Q1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM50774.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_106_000M1_scaffold_1020_24
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28980..29165
DNA (186bp) protein (62aa)
Toxin-antitoxin system antitoxin component PHD family n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FJ14_9FIRM
Toxin-antitoxin system antitoxin component PHD family {ECO:0000313|EMBL:CDB13238.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
prevent-host-death family protein
L3_106_000M1_scaffold_1020_25
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29372..30718
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FUZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB13239.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
internalin-like protein
L3_106_000M1_scaffold_1020_26
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30806..32395)
DNA (1590bp) protein (530aa)
NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain n=1 Tax=Eubacterium sp. CAG:156 RepID=R5Z2E0_9FIRM
NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain {ECO:0000313|EMBL:CDA28121.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain
L3_106_000M1_scaffold_1020_27
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32652..35273
DNA (2622bp) protein (874aa)
Putative translation elongation factor G n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FW31_9FIRM
Putative translation elongation factor G {ECO:0000313|EMBL:CDB13241.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
small GTP-binding protein domain
L3_106_000M1_scaffold_1020_28
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35443..37293)
DNA (1851bp) protein (617aa)
asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Eubacterium sp. CAG:161 RepID=R5L078_9FIRM
Asparagine synthetase {ECO:0000313|EMBL:CCY70784.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
L3_106_000M1_scaffold_1020_29
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37308..37913)
DNA (606bp) protein (202aa)
Dipicolinic acid synthetase B subunit n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FJ20_9FIRM
Dipicolinic acid synthetase B subunit {ECO:0000313|EMBL:CDB13243.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
spoVFB; dipicolinate synthase subunit B
L3_106_000M1_scaffold_1020_30
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37903..38718)
DNA (816bp) protein (272aa)
Putative dipicolinic acid synthetase A subunit n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FUZ7_9FIRM
Putative dipicolinic acid synthetase A subunit {ECO:0000313|EMBL:CDB13244.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
dpaA; dipicolinate synthase subunit A
Displaying items 1-30 of 41 in total

View Taxonomy