ggKbase home page

L3_106_000M1_scaffold_1795

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_1795_1
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

239..1060
DNA (822bp) protein (274aa)
Conserved domain protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6GFG8_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDB12997.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
hypothetical protein
L3_106_000M1_scaffold_1795_2
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1356..2756)
DNA (1401bp) protein (467aa)
MATE efflux family protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z3J2_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDM52482.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
putative efflux protein, MATE family
L3_106_000M1_scaffold_1795_3
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3355..4956
DNA (1602bp) protein (534aa)
Predicted exonuclease of the beta-lactamase fold involved in RNA processing n=1 Tax=Eubacterium sp. CAG:192 RepID=R6GIT3_9FIRM
Predicted exonuclease of the beta-lactamase fold involved in RNA processing {ECO:0000313|EMBL:CDB14107.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
Predicted exonuclease of the beta-lactamase fold involved in RNA processing
L3_106_000M1_scaffold_1795_4
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5032..5742
DNA (711bp) protein (237aa)
LytTr DNA-binding domain protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RV42_9CLOT
LytTr DNA-binding domain protein {ECO:0000313|EMBL:CCZ42474.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
LytTr DNA-binding domain-containing protein
L3_106_000M1_scaffold_1795_5
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5744..7021
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RW52_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42839.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_106_000M1_scaffold_1795_6
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7297..7758
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8P5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM50769.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_106_000M1_scaffold_1795_7
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7876..8349
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8P5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM50769.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_106_000M1_scaffold_1795_8
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8343..9152
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8P4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM50767.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_106_000M1_scaffold_1795_9
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9145..10017
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8P3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM50766.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_106_000M1_scaffold_1795_10
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10097..10741
DNA (645bp) protein (215aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8P2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM50765.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_106_000M1_scaffold_1795_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10994..15388
DNA (4395bp) protein (1465aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G4A0_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN25284.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_106_000M1_scaffold_1795_12
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15573..16397
DNA (825bp) protein (275aa)
Sortase SrtB family n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FUG8_9FIRM
Sortase SrtB family {ECO:0000313|EMBL:CDB12631.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
srtB; Sortase B
L3_106_000M1_scaffold_1795_13
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16600..17151
DNA (552bp) protein (184aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
3-Methyladenine DNA glycosylase n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FUT1_9FIRM
3-Methyladenine DNA glycosylase {ECO:0000313|EMBL:CDB13169.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
L3_106_000M1_scaffold_1795_14
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17259..17735
DNA (477bp) protein (159aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FIW3_9FIRM
transcription regulator
L3_106_000M1_scaffold_1795_15
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17858..18496
DNA (639bp) protein (213aa)
4'-phosphopantetheinyl transferase (EC:2.7.8.-)
Phosphopantetheine--protein transferase domain protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6GFY0_9FIRM
Phosphopantetheine--protein transferase domain protein {ECO:0000313|EMBL:CDB13167.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
L3_106_000M1_scaffold_1795_16
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18692..19552)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FVW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB13166.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
Predicted SAM-dependent methyltransferases
L3_106_000M1_scaffold_1795_17
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19918..20457
DNA (540bp) protein (180aa)
Rubredoxin n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FMB5_9FIRM
Rubredoxin {ECO:0000313|EMBL:CDB13165.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
Rubrerythrin
L3_106_000M1_scaffold_1795_18
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20907..21221
DNA (315bp) protein (105aa)
30S ribosomal protein S10 n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FUS8_9FIRM
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
SSU ribosomal protein S10P
L3_106_000M1_scaffold_1795_19
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21337..21966
DNA (630bp) protein (210aa)
50S ribosomal protein L3 n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FIV9_9FIRM
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
50S ribosomal protein L3
L3_106_000M1_scaffold_1795_20
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21990..22610
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Eubacterium sp. CAG:192 RepID=R6GFX3_9FIRM
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
LSU ribosomal protein L4P
L3_106_000M1_scaffold_1795_21
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22610..22909
DNA (300bp) protein (100aa)
50S ribosomal protein L23 n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FVV6_9FIRM
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
Ribosomal protein L23
L3_106_000M1_scaffold_1795_22
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23022..23864
DNA (843bp) protein (281aa)
50S ribosomal protein L2 n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FMB2_9FIRM
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
LSU ribosomal protein L2P
L3_106_000M1_scaffold_1795_23
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23878..24150
DNA (273bp) protein (91aa)
30S ribosomal protein S19 n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FUS3_9FIRM
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
SSU ribosomal protein S19P
L3_106_000M1_scaffold_1795_24
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24184..24570
DNA (387bp) protein (129aa)
50S ribosomal protein L22 n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FIV6_9FIRM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
rplV; 50S ribosomal protein L22
L3_106_000M1_scaffold_1795_25
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24586..25233
DNA (648bp) protein (216aa)
30S ribosomal protein S3 n=1 Tax=Eubacterium sp. CAG:192 RepID=R6GFW8_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
SSU ribosomal protein S3P
L3_106_000M1_scaffold_1795_26
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


25233..25670
DNA (438bp) protein (146aa)
50S ribosomal protein L16 n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FVV2_9FIRM
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
LSU ribosomal protein L16P
L3_106_000M1_scaffold_1795_27
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


25660..25869
DNA (210bp) protein (70aa)
50S ribosomal protein L29 n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FMA8_9FIRM
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
50S ribosomal protein L29
L3_106_000M1_scaffold_1795_28
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


25907..26161
DNA (255bp) protein (85aa)
30S ribosomal protein S17 n=2 Tax=environmental samples RepID=R5KUM8_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
30S ribosomal protein S17
L3_106_000M1_scaffold_1795_29
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


26191..26559
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FIV4_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
LSU ribosomal protein L14P
L3_106_000M1_scaffold_1795_30
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


26572..26883
DNA (312bp) protein (104aa)
50S ribosomal protein L24 n=1 Tax=Eubacterium sp. CAG:192 RepID=R6GFW0_9FIRM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
LSU ribosomal protein L24P
Displaying items 1-30 of 59 in total

View Taxonomy