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L3_106_000M1_scaffold_720

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_720_1
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1274
DNA (1272bp) protein (424aa)
Putative 4-hydroxy-2-ketovalerate aldolase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A493_9CLOT
Putative 4-hydroxy-2-ketovalerate aldolase {ECO:0000313|EMBL:CCX37713.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
4-hydroxy-2-ketovalerate aldolase
L3_106_000M1_scaffold_720_2
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1422..2777)
DNA (1356bp) protein (452aa)
Xanthine/uracil/vitamin C permease n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JPX7_CELLD
xanthine/uracil/vitamin C permease
Xanthine/uracil/vitamin C permease {ECO:0000313|EMBL:ADZ84912.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_106_000M1_scaffold_720_3
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3502..5190)
DNA (1689bp) protein (563aa)
Cadherin-like beta sandwich domain protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6U0_9CLOT
Cadherin-like beta sandwich domain protein {ECO:0000313|EMBL:CCX36752.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L3_106_000M1_scaffold_720_4
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5234..5755)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00035D0AAE
Putative lipoprotein {ECO:0000313|EMBL:EJF40354.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
putative membrane protein
L3_106_000M1_scaffold_720_5
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5895..6893
DNA (999bp) protein (333aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FRG7_9CLOT
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EMS71774.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
nucleoside-diphosphate-sugar epimerase
L3_106_000M1_scaffold_720_6
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6969..9599)
DNA (2631bp) protein (877aa)
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EJF38733.1}; EC=3.6.3.8 {ECO:0000313|EMBL:EJF38733.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
ATPase n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037335F2
cation transporting ATPase-like protein
L3_106_000M1_scaffold_720_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9930..10463
DNA (534bp) protein (178aa)
PAP2 family protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UZN6_CLOBO
PAP2 family protein {ECO:0000313|EMBL:EES47741.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
PAP2 family protein
L3_106_000M1_scaffold_720_8
unknown

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10758..11003
DNA (246bp) protein (82aa)

This feature has no annotations

L3_106_000M1_scaffold_720_9
Desulfosporosinus sp. HMP52, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11158..11319
DNA (162bp) protein (54aa)
Rubredoxin n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XVW1_9FIRM
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1487923 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. HMP52.;"
rubredoxin
L3_106_000M1_scaffold_720_10
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11513..12706
DNA (1194bp) protein (398aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0MWM1_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EJF38724.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
flavodoxin/nitric oxide synthase
L3_106_000M1_scaffold_720_11
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13475..15385)
DNA (1911bp) protein (637aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1GZJ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF38565.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_106_000M1_scaffold_720_12
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15360..16259)
DNA (900bp) protein (300aa)
ABC transporter n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003721031
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJF38536.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
ABC transporter-like protein
L3_106_000M1_scaffold_720_13
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16252..16662)
DNA (411bp) protein (137aa)
transcriptional regulator n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036AA6B9
Transcriptional regulator {ECO:0000313|EMBL:EJF38521.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
GntR family transcriptional regulator
L3_106_000M1_scaffold_720_14
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16732..17802)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI000378D48D
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:EJF38598.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
ytvI; sporulation integral membrane protein YtvI
L3_106_000M1_scaffold_720_15
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17997..18245)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO61611.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L3_106_000M1_scaffold_720_16
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

18616..20085
DNA (1470bp) protein (490aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y5I4_9FIRM
putative nicotinate phosphoribosyltransferase
L3_106_000M1_scaffold_720_17
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20623..22719)
DNA (2097bp) protein (699aa)
Type-3 glutamine synthetase {ECO:0000313|EMBL:CDZ23919.1}; EC=6.3.1.2 {ECO:0000313|EMBL:CDZ23919.1};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
glnA3-2; Type-3 glutamine synthetase (EC:6.3.1.2)
Glutamate--ammonia ligase, catalytic domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAH2_9CLOT
L3_106_000M1_scaffold_720_18
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23030..24136)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00035CAC13
YceG family protein {ECO:0000313|EMBL:EJF40941.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Predicted periplasmic solute-binding protein
L3_106_000M1_scaffold_720_19
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24236..25285)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC05356.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L3_106_000M1_scaffold_720_20
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25509..25706
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003688B56
Spore coat-associated protein JA CotJA {ECO:0000313|EMBL:EJF40872.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_106_000M1_scaffold_720_21
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25703..25963
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI000370411D
Protein CotJB {ECO:0000313|EMBL:EJF40807.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_106_000M1_scaffold_720_22
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26121..26297
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00035FE0B0
Uncharacterized protein {ECO:0000313|EMBL:EJF40141.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L3_106_000M1_scaffold_720_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26380..27009
DNA (630bp) protein (210aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7Q8_9FIRM
L3_106_000M1_scaffold_720_24
unknown

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27042..27212
DNA (171bp) protein (57aa)

This feature has no annotations

L3_106_000M1_scaffold_720_25
unknown

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27228..27389
DNA (162bp) protein (54aa)

This feature has no annotations

L3_106_000M1_scaffold_720_26
unknown

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comp(27413..27646)
DNA (234bp) protein (78aa)

This feature has no annotations

L3_106_000M1_scaffold_720_27
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27743..29137
DNA (1395bp) protein (465aa)
Resolvase, N-terminal domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECX6_9CLOT
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEG30628.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
putative site-specific recombinase
L3_106_000M1_scaffold_720_28
Thermoanaerobacterium saccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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29472..30242
DNA (771bp) protein (257aa)
polyprenyl glycosylphosphotransferase n=1 Tax=Thermoanaerobacter indiensis RepID=UPI00036B0090
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:AFK85623.1}; TaxID=1094508 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485).;"
L3_106_000M1_scaffold_720_29
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30251..31420
DNA (1170bp) protein (390aa)
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TIJ7_9CLOT
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC {ECO:0000313|EMBL:CCZ63139.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
L3_106_000M1_scaffold_720_30
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31480..32610
DNA (1131bp) protein (377aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HH62_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99412.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
glycosyl transferase family protein
Displaying items 1-30 of 65 in total

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