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L3_106_000M1_scaffold_4817

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_4817_1
unknown

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comp(1..96)
DNA (96bp) protein (32aa)

This feature has no annotations

L3_106_000M1_scaffold_4817_2
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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323..535
DNA (213bp) protein (71aa)
Uncharacterized conserved protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N3N8_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CDC02899.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L3_106_000M1_scaffold_4817_3
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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616..2247
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037DBBFA
PF06245 family protein {ECO:0000313|EMBL:EJF39268.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_106_000M1_scaffold_4817_4
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2379..3377
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI000376CF61
Uncharacterized protein {ECO:0000313|EMBL:EGG80876.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
aldo/keto reductase
L3_106_000M1_scaffold_4817_5
unknown

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comp(3452..3742)
DNA (291bp) protein (97aa)

This feature has no annotations

L3_106_000M1_scaffold_4817_6
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4198..4704
DNA (507bp) protein (169aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LTU5_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS59147.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
RNA polymerase ECF subfamily sigma factor
L3_106_000M1_scaffold_4817_7
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4701..5171
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PAW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS11298.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_106_000M1_scaffold_4817_8
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5158..5727
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BMF3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA62099.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
L3_106_000M1_scaffold_4817_9
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5714..6583
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2EX54_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERI99432.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
L3_106_000M1_scaffold_4817_10
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6656..7018)
DNA (363bp) protein (121aa)
membrane protein n=1 Tax=Butyrivibrio sp. AE3009 RepID=UPI0003B2EF63
membrane protein
Membrane protein {ECO:0000313|EMBL:AHC17986.1}; TaxID=1429244 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa CR1.;"
L3_106_000M1_scaffold_4817_11
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7377..9575)
DNA (2199bp) protein (733aa)
Tex-like protein N-terminal domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N515_9CLOT
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:CDC03424.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Transcriptional accessory protein
L3_106_000M1_scaffold_4817_12
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9580..10683)
DNA (1104bp) protein (368aa)
Acetyltransferase n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EJ78_THECK
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGA59669.1}; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
L3_106_000M1_scaffold_4817_13
Paenibacillus sp. FSL R5-192, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10861..12243)
DNA (1383bp) protein (461aa)
Putative S-layer protein {ECO:0000313|EMBL:ETT35123.1}; TaxID=1226754 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-192.;"
L3_106_000M1_scaffold_4817_14
unknown

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comp(12772..12909)
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 14 items

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