ggKbase home page

L3_106_000M1_scaffold_3068

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_3068_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11..292
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CES0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33010.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_106_000M1_scaffold_3068_2
unknown

Not on your lists

289..600
DNA (312bp) protein (104aa)

This feature has no annotations

L3_106_000M1_scaffold_3068_3
unknown

Not on your lists

comp(647..832)
DNA (186bp) protein (62aa)

This feature has no annotations

L3_106_000M1_scaffold_3068_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1214..2008
DNA (795bp) protein (265aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2SKC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52307.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_106_000M1_scaffold_3068_5
unknown

Not on your lists

comp(2322..2972)
DNA (651bp) protein (217aa)

This feature has no annotations

L3_106_000M1_scaffold_3068_6
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2997..5123
DNA (2127bp) protein (709aa)
Putative phage terminase, large subunit n=2 Tax=Oscillibacter RepID=U2R2I8_9FIRM
Putative phage terminase, large subunit {ECO:0000313|EMBL:ERK63071.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
phage terminase, large subunit
L3_106_000M1_scaffold_3068_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5120..6325
DNA (1206bp) protein (402aa)
HK97 family phage portal protein n=1 Tax=Dorea sp. 5-2 RepID=R9MTW2_9FIRM
Phage portal protein {ECO:0000313|EMBL:KHD14354.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
Phage portal protein
L3_106_000M1_scaffold_3068_8
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6315..6887
DNA (573bp) protein (191aa)
HK97 family phage prohead protease n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B0H4_9FIRM
HK97 family phage prohead protease {ECO:0000313|EMBL:KGJ54080.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L3_106_000M1_scaffold_3068_9
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

6890..8569
DNA (1680bp) protein (560aa)
Phage capsid protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERX1_9FIRM
Phage capsid protein {ECO:0000313|EMBL:CDB03378.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
phage major capsid protein, HK97 family
L3_106_000M1_scaffold_3068_10
unknown

Not on your lists

8583..8882
DNA (300bp) protein (100aa)

This feature has no annotations

L3_106_000M1_scaffold_3068_11
unknown

Not on your lists

8879..9235
DNA (357bp) protein (119aa)

This feature has no annotations

L3_106_000M1_scaffold_3068_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9219..9602
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PND4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76069.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_106_000M1_scaffold_3068_13
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9599..9913
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IZ90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS27173.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L3_106_000M1_scaffold_3068_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9916..10497
DNA (582bp) protein (194aa)
Phage major tail protein, phi13 family n=2 Tax=Oscillibacter RepID=U2R3I9_9FIRM
Phage major tail protein, phi13 family {ECO:0000313|EMBL:ERK63079.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
phage major tail protein, phi13 family
L3_106_000M1_scaffold_3068_15
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10497..10889
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5V094_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ83680.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
hypothetical protein
L3_106_000M1_scaffold_3068_16
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10886..11050
DNA (165bp) protein (55aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R9IF73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS24420.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
phage-like protein
L3_106_000M1_scaffold_3068_17
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11065..13065
DNA (2001bp) protein (667aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CRB2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA79303.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
Phage-related minor tail protein
L3_106_000M1_scaffold_3068_18
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13065..13454
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C3E5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI79035.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_106_000M1_scaffold_3068_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13454..15658
DNA (2205bp) protein (735aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BLL5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI79034.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
PE-PGRS family protein
L3_106_000M1_scaffold_3068_20
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15655..16287
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74803.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_106_000M1_scaffold_3068_21
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16303..17175
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74802.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_106_000M1_scaffold_3068_22
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17187..17516
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BLL1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI79029.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_106_000M1_scaffold_3068_23
unknown

Not on your lists

17535..19226
DNA (1692bp) protein (564aa)

This feature has no annotations

L3_106_000M1_scaffold_3068_24
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19272..19547
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:52 RepID=R6G202_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB19488.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
L3_106_000M1_scaffold_3068_25
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19600..19956
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R190_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK62289.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_106_000M1_scaffold_3068_26
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19946..20218
DNA (273bp) protein (91aa)
Phage phi LC3 family holin n=1 Tax=Clostridium sp. ASF356 RepID=N1Z581_9CLOT
Phage phi LC3 family holin {ECO:0000313|EMBL:EMZ12257.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
holin
L3_106_000M1_scaffold_3068_27
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20580..20801
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L0S3_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK99101.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
Displaying 27 items

View Taxonomy