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L3_106_000M1_scaffold_5162

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_5162_1
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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43..318
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HD61_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF00765.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L3_106_000M1_scaffold_5162_2
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(403..1935)
DNA (1533bp) protein (511aa)
Mg chelatase-like protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N010_9CLOT
Mg chelatase-like protein {ECO:0000313|EMBL:EJF40034.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
yifB; putative protein YifB
L3_106_000M1_scaffold_5162_3
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2022..2504)
DNA (483bp) protein (161aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
Respiratory-chain NADH dehydrogenase 24 Kd subunit n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6G7_9FIRM
Respiratory-chain NADH dehydrogenase 24 Kd subunit {ECO:0000313|EMBL:EDS12792.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_106_000M1_scaffold_5162_4
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2600..3301)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPT5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO62747.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L3_106_000M1_scaffold_5162_5
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3527..4177
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037C926A
Putative RNA polymerase sigma-H factor {ECO:0000313|EMBL:EJF40203.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
sigH; RNA polymerase factor sigma-70
L3_106_000M1_scaffold_5162_6
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4281..4556
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6S2G9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40827.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_106_000M1_scaffold_5162_7
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4738..4941
DNA (204bp) protein (68aa)
Hydrid cluster protein-associated redox disulfide domain protein n=2 Tax=Clostridium RepID=A7VVR6_9CLOT
Hydrid cluster protein-associated redox disulfide domain protein {ECO:0000313|EMBL:EDO61066.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Domain of unknown function (DUF1858).
L3_106_000M1_scaffold_5162_8
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5022..6503
DNA (1482bp) protein (494aa)
Dinuclear metal center protein YbgI family n=1 Tax=Clostridium sp. CAG:964 RepID=R6TZV8_9CLOT
Dinuclear metal center protein YbgI family {ECO:0000313|EMBL:CDC78963.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
hypothetical protein
L3_106_000M1_scaffold_5162_9
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6552..8297
DNA (1746bp) protein (582aa)
Putative fibronectin-binding protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H3T1_9CLOT
Putative fibronectin-binding protein {ECO:0000313|EMBL:EJF40150.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Predicted RNA-binding protein homologous to eukaryotic snRNP
L3_106_000M1_scaffold_5162_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8555..10129
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YI03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35588.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L3_106_000M1_scaffold_5162_11
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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10144..11376
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K6C5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN42215.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
glycosyl transferase
L3_106_000M1_scaffold_5162_12
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11438..11923
DNA (486bp) protein (162aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BJV5_9CLOT
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDA61059.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
epsM; protein involved in exopolysaccharide synthesis
Displaying 12 items

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