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L3_106_000M1_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 228 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_17_1
Alistipes sp. CAG:435, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..106
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:435 RepID=R6X9Z0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD18385.1}; TaxID=1262695 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:435.;"
L3_106_000M1_scaffold_17_2
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

124..3381
DNA (3258bp) protein (1086aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00031BE4CD
family 2 glycoside hydrolase
Tax=GWE2_Bacteroidetes_42_39_curated
L3_106_000M1_scaffold_17_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3477..5300)
DNA (1824bp) protein (608aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00037750F7
Uncharacterized protein {ECO:0000313|EMBL:CDD12104.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_106_000M1_scaffold_17_4
Capnocytophaga ochracea, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5378..6613)
DNA (1236bp) protein (412aa)
Major facilitator superfamily MFS_1 n=1 Tax=Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) RepID=C7M959_CAPOD
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACU92405.1}; Flags: Precursor;; TaxID=521097 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 /; NCTC 12371 / VPI 2845) (Bacteroides ochraceus).;"
L3_106_000M1_scaffold_17_5
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6695..7759)
DNA (1065bp) protein (355aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H785_9BACT
L3_106_000M1_scaffold_17_6
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7782..8660)
DNA (879bp) protein (293aa)
nucleotidyltransferase n=1 Tax=Alistipes sp. AP11 RepID=UPI000314841D
Uncharacterized protein {ECO:0000313|EMBL:EHB92723.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_106_000M1_scaffold_17_7
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8964..9839
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002DE8341
Uncharacterized protein {ECO:0000313|EMBL:EHB92722.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Membrane-bound metallopeptidase
L3_106_000M1_scaffold_17_8
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9894..11048
DNA (1155bp) protein (385aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D8EF34
L3_106_000M1_scaffold_17_9
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11080..12411
DNA (1332bp) protein (444aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D3D348
RIP metalloprotease RseP
L3_106_000M1_scaffold_17_10
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12428..13810
DNA (1383bp) protein (461aa)
DNA repair protein radA n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H779_9BACT
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
DNA replication and repair protein RadA
L3_106_000M1_scaffold_17_11

Not on your lists

comp(14077..14472)
DNA (396bp) protein (132aa)
RNase P protein component (EC:3.1.26.5)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F6CB22
Ribonuclease P protein component {ECO:0000313|EMBL:EKC71380.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_106_000M1_scaffold_17_12
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14486..15424)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E0F049
Uncharacterized protein {ECO:0000313|EMBL:EHB92745.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
uroporphyrinogen-III synthase
L3_106_000M1_scaffold_17_13
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15504..16331)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00031BB2C1
Uncharacterized protein {ECO:0000313|EMBL:EHB92746.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_106_000M1_scaffold_17_14
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16341..17477)
DNA (1137bp) protein (379aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
histidine kinase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D7036E
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_106_000M1_scaffold_17_15
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17553..19226)
DNA (1674bp) protein (558aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002DCA164
Uncharacterized protein {ECO:0000313|EMBL:EHB92748.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
C-terminal processing peptidase
L3_106_000M1_scaffold_17_16
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19361..19831)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000361E4BA
Uncharacterized protein {ECO:0000313|EMBL:EHB92749.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_106_000M1_scaffold_17_17
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19923..20501)
DNA (579bp) protein (193aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D333AF
putative 5-formyltetrahydrofolate cyclo-ligase
L3_106_000M1_scaffold_17_18
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20686..21378
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H7B3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB92752.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
cytochrome B subunit
L3_106_000M1_scaffold_17_19
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21421..23364
DNA (1944bp) protein (648aa)
succinate dehydrogenase subunit A (EC:1.3.99.1 1.3.5.1)
succinate dehydrogenase n=1 Tax=Alistipes sp. AP11 RepID=UPI00037EAEEE
Uncharacterized protein {ECO:0000313|EMBL:EHB92753.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_106_000M1_scaffold_17_20
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23394..24137
DNA (744bp) protein (248aa)
Succinate dehydrogenase iron-sulfur protein (EC:1.3.99.1)
succinate dehydrogenase n=1 Tax=Alistipes sp. AP11 RepID=UPI00030F2621
Uncharacterized protein {ECO:0000313|EMBL:EHB92754.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_106_000M1_scaffold_17_21
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24410..25393
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D5432F
NAD-dependent epimerase/dehydratase
Tax=GWF2_Bacteroidetes_38_335_curated
L3_106_000M1_scaffold_17_22
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25449..27500)
DNA (2052bp) protein (684aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002EAFD34
Uncharacterized protein {ECO:0000313|EMBL:EHB93274.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
serine protease, S9A family peptidase
L3_106_000M1_scaffold_17_23
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27618..28439
DNA (822bp) protein (274aa)
Tetrahydrodipicolinate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002FF6594
Putative 2 3 4 5-tetrahydropyridine-2 6-dicarboxylate N-succinyltransferase {ECO:0000313|EMBL:CDD23960.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_106_000M1_scaffold_17_24
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28446..29225
DNA (780bp) protein (260aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
BirA, biotin-[acetyl-CoA-carboxylase] ligase region {ECO:0000313|EMBL:CBK64573.1}; EC=6.3.4.15 {ECO:0000313|EMBL:CBK64573.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00037568C7
L3_106_000M1_scaffold_17_25
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29290..29778
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00031EAE78
Uncharacterized protein {ECO:0000313|EMBL:EHB93269.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
RNA polymerase subunit sigma-24
L3_106_000M1_scaffold_17_26
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29778..30617
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003130E49
Uncharacterized protein {ECO:0000313|EMBL:EHB93268.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_106_000M1_scaffold_17_27
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30610..31452
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D37C05
Uncharacterized protein {ECO:0000313|EMBL:EHB93267.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_106_000M1_scaffold_17_28
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31757..32635
DNA (879bp) protein (293aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F31028
L3_106_000M1_scaffold_17_29
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32860..34224
DNA (1365bp) protein (455aa)
citrate synthase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E96774
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
citrate synthase
L3_106_000M1_scaffold_17_30
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34375..36048
DNA (1674bp) protein (558aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00030BD979
Uncharacterized protein {ECO:0000313|EMBL:EHB93262.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
Displaying items 1-30 of 228 in total

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