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L3_106_000M1_scaffold_21

Search features with annotation key words

Displaying items 1-30 of 228 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_21_1
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1136..1318
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002FDF9DB
Uncharacterized protein {ECO:0000313|EMBL:EHB91850.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_106_000M1_scaffold_21_2
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1332..1703
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000381B9D3
Uncharacterized protein {ECO:0000313|EMBL:EHB91851.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_106_000M1_scaffold_21_3
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1696..1998
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5HB86_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB91852.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_106_000M1_scaffold_21_4
unknown

Not on your lists

comp(2223..3233)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F9CB40
L3_106_000M1_scaffold_21_5
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3686..4792
DNA (1107bp) protein (369aa)
Putative uncharacterized protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UK37_TANFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW22611.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
L3_106_000M1_scaffold_21_6
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5184..6314
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F3E6C1
Alkaline phosphatase family protein {ECO:0000313|EMBL:EDS03251.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
alkaline phosphatase
L3_106_000M1_scaffold_21_7
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6377..8638)
DNA (2262bp) protein (754aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002DAA40A
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:KKB48666.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
cation-transporting ATPase pacS
L3_106_000M1_scaffold_21_8
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8749..9846)
DNA (1098bp) protein (366aa)
Enoyl-[acyl-carrier-protein] reductase (FMN) (EC:1.3.1.9)
2-nitropropane dioxygenase n=1 Tax=Alistipes sp. AP11 RepID=UPI0003684137
Uncharacterized protein {ECO:0000313|EMBL:EHB93122.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_106_000M1_scaffold_21_9
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10016..10849)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003096910
Uncharacterized protein {ECO:0000313|EMBL:EHB93124.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_106_000M1_scaffold_21_10
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11036..12130
DNA (1095bp) protein (365aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002DEF8F0
L3_106_000M1_scaffold_21_11
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12184..14127
DNA (1944bp) protein (648aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
threonyl-tRNA synthetase (EC:6.1.1.3)
threonyl-tRNA synthetase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F0B4B0
L3_106_000M1_scaffold_21_12
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14276..14800
DNA (525bp) protein (175aa)
Translation initiation factor IF-3 n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H633_9BACT
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
translation initiation factor IF-3
L3_106_000M1_scaffold_21_13
unknown

Not on your lists

14907..15686
DNA (780bp) protein (260aa)

This feature has no annotations

L3_106_000M1_scaffold_21_14
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

Not on your lists

15726..16775
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D3FAA5
Uncharacterized protein {ECO:0000313|EMBL:EDM25904.1}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;"
hypothetical protein
L3_106_000M1_scaffold_21_15
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16827..18584
DNA (1758bp) protein (586aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002ECCD1A
Uncharacterized protein {ECO:0000313|EMBL:CCY37610.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
L3_106_000M1_scaffold_21_16
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18604..18810
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H6H3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB92984.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
cation transport ATPase
L3_106_000M1_scaffold_21_17
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18878..20407)
DNA (1530bp) protein (510aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H7J3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB92832.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_106_000M1_scaffold_21_18
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(20516..21673)
DNA (1158bp) protein (386aa)
Major facilitator superfamily MFS_1 n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DSL8_9BACT
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CDD93043.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
major facilitator superfamily protein
L3_106_000M1_scaffold_21_19
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21827..22822)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D45136
Uncharacterized protein {ECO:0000313|EMBL:EHB91972.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
cation diffusion facilitator family transporter
L3_106_000M1_scaffold_21_20
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22958..24343)
DNA (1386bp) protein (462aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H6X0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB92609.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
ccp; cytochrome-C peroxidase
L3_106_000M1_scaffold_21_21
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24456..26768)
DNA (2313bp) protein (771aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002FE2132
Endopygalactorunase-like protein {ECO:0000313|EMBL:CDC60849.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
endopygalactorunase-like protein
L3_106_000M1_scaffold_21_22
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27171..27425
DNA (255bp) protein (85aa)
DNA-binding protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F92F43
Uncharacterized protein {ECO:0000313|EMBL:EHB92421.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_106_000M1_scaffold_21_23
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27702..30746
DNA (3045bp) protein (1015aa)
preprotein translocase subunit SecD n=1 Tax=Alistipes sp. AP11 RepID=UPI000364DFA6
Uncharacterized protein {ECO:0000313|EMBL:EHB92423.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Protein-export membrane protein SecD / Protein-export membrane protein SecF
L3_106_000M1_scaffold_21_24
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30835..31623
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002EE3E4C
Uncharacterized protein {ECO:0000313|EMBL:EHB92424.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
conserved hypothetical protein TIGR00159
L3_106_000M1_scaffold_21_25
unknown

Not on your lists

31652..33379
DNA (1728bp) protein (576aa)

This feature has no annotations

L3_106_000M1_scaffold_21_26
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33510..33881
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00036E1E4F
Uncharacterized protein {ECO:0000313|EMBL:EDV00568.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
L3_106_000M1_scaffold_21_27
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33930..34775)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00030C42F8
Uncharacterized protein {ECO:0000313|EMBL:CCZ10829.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
phospholipase A1
L3_106_000M1_scaffold_21_28
unknown

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comp(34772..34921)
DNA (150bp) protein (50aa)

This feature has no annotations

L3_106_000M1_scaffold_21_29
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35154..36038
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000306C5A1
Uncharacterized protein {ECO:0000313|EMBL:KKB50453.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
AraC family transcriptional regulator
L3_106_000M1_scaffold_21_30
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(36130..37500)
DNA (1371bp) protein (457aa)
Tat pathway signal protein n=1 Tax=Rudanella lutea RepID=UPI000381DA02
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42017.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
Displaying items 1-30 of 228 in total

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