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L3_106_000M1_scaffold_34

Search features with annotation key words

Displaying items 1-30 of 220 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_34_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..1173)
DNA (1173bp) protein (391aa)
Putative uncharacterized protein n=1 Tax=Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108) RepID=E6SPE4_BACT6
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAH09501.1}; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
L3_106_000M1_scaffold_34_2
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1598..2770)
DNA (1173bp) protein (391aa)
Tight junction protein ZO-3 n=1 Tax=Bacteroides eggerthii 1_2_48FAA RepID=E5WZV9_9BACE
Tight junction protein ZO-3 {ECO:0000313|EMBL:EFV29593.1}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
hypothetical protein
L3_106_000M1_scaffold_34_3
unknown

Not on your lists

comp(2784..3035)
DNA (252bp) protein (84aa)

This feature has no annotations

L3_106_000M1_scaffold_34_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4095..4826
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6ID71_9BACE
Lanthionine synthetase C-like family protein {ECO:0000313|EMBL:EXY68576.1}; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
hypothetical protein
L3_106_000M1_scaffold_34_5
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4823..6106
DNA (1284bp) protein (428aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EEF92142.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEF92142.1};; TaxID=537012 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus DSM 14838.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=E2N7G7_9BACE
glycosyltransferase
L3_106_000M1_scaffold_34_6
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(6318..7445)
DNA (1128bp) protein (376aa)
Lanthionine synthetase C family protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0L7_PEDHD
Lanthionine synthetase C family protein
Tax=GWF2_Bacteroidetes_35_48_curated
L3_106_000M1_scaffold_34_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7466..9532)
DNA (2067bp) protein (689aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003744E37
Uncharacterized protein {ECO:0000313|EMBL:EEF62214.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
L3_106_000M1_scaffold_34_8
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9576..10529)
DNA (954bp) protein (318aa)
Putative glycosyltransferase EpsE {ECO:0000313|EMBL:KHJ36984.1}; EC=2.4.-.- {ECO:0000313|EMBL:KHJ36984.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase (EC:2.4.1.-)
Glycosyltransferase, group 2 family protein n=1 Tax=Aerococcus viridans ATCC 11563 RepID=D4YF01_9LACT
L3_106_000M1_scaffold_34_9
Mucinivorans hirudinis, Mucinivorans, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10561..11811)
DNA (1251bp) protein (417aa)
putative hemolysin secretion protein
Putative hemolysin secretion protein {ECO:0000313|EMBL:CDN30412.1}; TaxID=1433126 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans.;" source="Mucinivorans hirudinis.;"
Putative uncharacterized protein id=4175668 bin=GWF2_Bacteroidetes_40_14 species=Bacteroides sp. 2_1_56FAA genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
L3_106_000M1_scaffold_34_10
Mucinivorans hirudinis, Mucinivorans, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11863..13923)
DNA (2061bp) protein (687aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LSA3_9BACE
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDN30687.1}; TaxID=1433126 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans.;" source="Mucinivorans hirudinis.;"
L3_106_000M1_scaffold_34_11
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14366..15154)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002FD8B92
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGJ50453.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
L3_106_000M1_scaffold_34_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15159..15896
DNA (738bp) protein (246aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=G1UL41_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22481.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_106_000M1_scaffold_34_13
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15774..16061)
DNA (288bp) protein (96aa)
dam_2; DNA adenine methylase (EC:2.1.1.72)
D12 class N6 adenine-specific DNA methyltransferase n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3R1B1_9BACE
D12 class N6 adenine-specific DNA methyltransferase {ECO:0000313|EMBL:EEO57995.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
L3_106_000M1_scaffold_34_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16334..17656)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=K1FCL2_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA91955.1}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;"
hypothetical protein
L3_106_000M1_scaffold_34_15
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18372..19001)
DNA (630bp) protein (210aa)
Relaxase/mobilization nuclease domain protein (Fragment) n=1 Tax=Parabacteroides sp. D13 RepID=C7X7T0_9PORP
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EEU52138.1}; Flags: Fragment;; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Relaxase/Mobilisation nuclease domain.
L3_106_000M1_scaffold_34_16
unknown

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comp(19608..20297)
DNA (690bp) protein (230aa)

This feature has no annotations

L3_106_000M1_scaffold_34_17
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20712..21533)
DNA (822bp) protein (274aa)
Fic family protein n=2 Tax=Bacteroidetes RepID=F3Y2F2_9FLAO
Fic family protein {ECO:0000313|EMBL:GAK37186.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
Fic family protein
L3_106_000M1_scaffold_34_18
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21641..21949)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X7T1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU52139.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_106_000M1_scaffold_34_19
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23312..24262
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3R1F5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO58039.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
Putative amidoligase enzyme.
L3_106_000M1_scaffold_34_20
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24246..24476
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3R1F6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN00596.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
hypothetical protein
L3_106_000M1_scaffold_34_21

Not on your lists

24775..25059
DNA (285bp) protein (95aa)
Histone-like bacterial DNA-binding protein n=1 Tax=human gut metagenome RepID=K1SFZ6_9ZZZZ
Histone-like bacterial DNA-binding protein {ECO:0000313|EMBL:EKC46356.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Bacterial DNA-binding protein
L3_106_000M1_scaffold_34_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25326..26078
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QZZ3_9BACE
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:KDS15801.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
ATPases involved in chromosome partitioning
L3_106_000M1_scaffold_34_23
unknown

Not on your lists

26078..26509
DNA (432bp) protein (144aa)

This feature has no annotations

L3_106_000M1_scaffold_34_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26523..27383
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M705_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS15803.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
hypothetical protein
L3_106_000M1_scaffold_34_25
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27866..28180
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X3Z3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05282.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
conjugative transposon protein TraF
L3_106_000M1_scaffold_34_26
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28479..29180
DNA (702bp) protein (234aa)
Conjugation system ATPase, TraG family (Fragment) n=3 Tax=Bacteroides RepID=C3QZZ7_9BACE
TraG family conjugation system ATPase {ECO:0000313|EMBL:EIY31186.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
traG; conjugative transposon protein TraG
L3_106_000M1_scaffold_34_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29241..29489
DNA (249bp) protein (83aa)
TraG family conjugation system ATPase n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1H8Q4_BACFG
TraG family conjugation system ATPase {ECO:0000313|EMBL:EKA79213.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
traG; conjugate transposon protein TraG
L3_106_000M1_scaffold_34_28
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29547..30710
DNA (1164bp) protein (388aa)
Conjugation system ATPase, TraG family n=1 Tax=Porphyromonas gingivalis W4087 RepID=U2K0J8_PORGN
Conjugal transfer protein TraG {ECO:0000313|EMBL:KGN79865.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium COT-184 OH4590.;"
conjugal transfer protein TraG
L3_106_000M1_scaffold_34_29
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30820..31335
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I8YSC5_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY65457.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
conserved hypothetical protein found on conjugate transposon
L3_106_000M1_scaffold_34_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31384..31794
DNA (411bp) protein (137aa)
Conjugative transposon TraJ protein n=3 Tax=Bacteroides RepID=I9SB33_9BACE
Conjugative transposon TraJ protein {ECO:0000313|EMBL:EKA79211.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
Homologues of TraJ from Bacteroides conjugative transposon.
Displaying items 1-30 of 220 in total

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