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L3_106_000M1_scaffold_357

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_357_1
unknown

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comp(1..408)
DNA (408bp) protein (136aa)

This feature has no annotations

L3_106_000M1_scaffold_357_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

838..1767
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002D8C953
HEPN domain protein {ECO:0000313|EMBL:CDD25606.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
HEPN domain.
L3_106_000M1_scaffold_357_3
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1849..3033)
DNA (1185bp) protein (395aa)
Aspartate aminotransferase (EC:2.6.1.1)
cystathionine beta-lyase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002EC57D8
Uncharacterized protein {ECO:0000313|EMBL:EHB92665.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_106_000M1_scaffold_357_4
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3170..4660
DNA (1491bp) protein (497aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
pseudouridine synthase family (EC:5.4.99.12)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E43B83
L3_106_000M1_scaffold_357_5
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5351..5932
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00036BA1FD
Uncharacterized protein {ECO:0000313|EMBL:EHB91688.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
transcriptional regulator
L3_106_000M1_scaffold_357_6
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5953..7614
DNA (1662bp) protein (554aa)
Long-chain-fatty-acid-CoA ligase (EC:6.2.1.3)
AMP-binding protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000304ADB0
Uncharacterized protein {ECO:0000313|EMBL:EHB91687.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_106_000M1_scaffold_357_7
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7741..8472)
DNA (732bp) protein (244aa)
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002EAD58F
Uncharacterized protein {ECO:0000313|EMBL:EHB91645.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_106_000M1_scaffold_357_8
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8474..9106)
DNA (633bp) protein (211aa)
cytochrome B561 n=1 Tax=Alistipes sp. AP11 RepID=UPI0002DA46A6
Uncharacterized protein {ECO:0000313|EMBL:EHB91646.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_106_000M1_scaffold_357_9
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9219..10247)
DNA (1029bp) protein (343aa)
tRNA methyl transferase n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5HAN1_9BACT
tRNA methyl transferase {ECO:0000313|EMBL:EHB91647.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
tRNA-specific 2-thiouridylase mnmA
L3_106_000M1_scaffold_357_10
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10305..10655)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F074D4
Uncharacterized protein {ECO:0000313|EMBL:GAF03050.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
hypothetical protein
L3_106_000M1_scaffold_357_11
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10808..12394)
DNA (1587bp) protein (529aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00031A4C4C
Uncharacterized protein {ECO:0000313|EMBL:EHB91648.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
C-terminal processing peptidase
L3_106_000M1_scaffold_357_12
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12449..13816)
DNA (1368bp) protein (456aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5HAN3_9BACT
L3_106_000M1_scaffold_357_13
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13838..14734)
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B6Y6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB55970.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
hypothetical protein
L3_106_000M1_scaffold_357_14
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14748..16424)
DNA (1677bp) protein (559aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5HAN4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB91650.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
ChvD family ATP-binding protein
L3_106_000M1_scaffold_357_15
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16517..17329)
DNA (813bp) protein (271aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6)
glucosamine-6-phosphate deaminase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E34CC1
L3_106_000M1_scaffold_357_16
unknown

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comp(17436..17975)
DNA (540bp) protein (180aa)

This feature has no annotations

L3_106_000M1_scaffold_357_17
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18006..19952)
DNA (1947bp) protein (649aa)
Glucosamine-6-phosphate deaminase (EC:3.5.99.6)
glucosamine-6-phosphate deaminase n=1 Tax=Alistipes sp. AP11 RepID=UPI00037D176C
Uncharacterized protein {ECO:0000313|EMBL:EHB91652.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_106_000M1_scaffold_357_18
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20192..22084
DNA (1893bp) protein (631aa)
Pyruvate carboxylase (EC:6.4.1.1)
carboxylase n=1 Tax=Alistipes sp. AP11 RepID=UPI00031BA87A
Uncharacterized protein {ECO:0000313|EMBL:EHB93243.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_106_000M1_scaffold_357_19
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22189..23235
DNA (1047bp) protein (349aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H7Y0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB92579.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_106_000M1_scaffold_357_20
Prevotella maculosa, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(23296..25797)
DNA (2502bp) protein (834aa)
Putative uncharacterized protein n=1 Tax=Prevotella maculosa OT 289 RepID=H1HQI5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHO66109.1}; TaxID=999422 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella maculosa OT 289.;"
hypothetical protein
L3_106_000M1_scaffold_357_21
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26651..27838
DNA (1188bp) protein (396aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H796_9BACT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L3_106_000M1_scaffold_357_22
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27973..28164
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00030342A9
Preprotein translocase, SecE subunit {ECO:0000313|EMBL:EHB92734.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L3_106_000M1_scaffold_357_23
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28186..28743
DNA (558bp) protein (186aa)
transcription antitermination protein NusG n=1 Tax=Alistipes sp. AP11 RepID=UPI00030C6DCB
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
transcription antitermination protein nusG
L3_106_000M1_scaffold_357_24
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


28760..29200
DNA (441bp) protein (147aa)
50S ribosomal protein L11 n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H793_9BACT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
LSU ribosomal protein L11P
L3_106_000M1_scaffold_357_25
Alistipes sp. CAG:157, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


29219..29917
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002EAFC28
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1262692 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:157.;"
50S ribosomal protein L1
L3_106_000M1_scaffold_357_26
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


29929..30450
DNA (522bp) protein (174aa)
50S ribosomal protein L10 n=1 Tax=Alistipes sp. AP11 RepID=UPI0002FD9272
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
LSU ribosomal protein L10p (P0)
L3_106_000M1_scaffold_357_27
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30575..30952
DNA (378bp) protein (126aa)
50S ribosomal protein L7 n=1 Tax=Alistipes sp. AP11 RepID=UPI000316B612
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
LSU ribosomal protein L12P
L3_106_000M1_scaffold_357_28
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31223..35041
DNA (3819bp) protein (1273aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Alistipes sp. AP11 RepID=UPI000369B319
DNA-directed RNA polymerase subunit beta
L3_106_000M1_scaffold_357_29
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35147..39400
DNA (4254bp) protein (1418aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Alistipes sp. AP11 RepID=UPI00037E2D73
L3_106_000M1_scaffold_357_30
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39471..40910)
DNA (1440bp) protein (480aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B6503D
Uncharacterized protein {ECO:0000313|EMBL:KIC96224.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
putative beta-fructofuranosidase protein
Displaying items 1-30 of 92 in total

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