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L3_106_000M1_scaffold_802

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_802_1
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(209..1681)
DNA (1473bp) protein (491aa)
wapA2; tRNA3(Ser)-specific nuclease WapA (EC:3.1.-.-)
Uncharacterized protein n=1 Tax=Caloramator australicus RC3 RepID=I7KTK6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCJ33133.1}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
L3_106_000M1_scaffold_802_2
unknown

Not on your lists

1723..1929
DNA (207bp) protein (69aa)

This feature has no annotations

L3_106_000M1_scaffold_802_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2133..2798
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72519.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_106_000M1_scaffold_802_4
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3015..3374)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IKA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51896.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_106_000M1_scaffold_802_5

Not on your lists

comp(3545..3940)
DNA (396bp) protein (132aa)
Protein translocase subunit yajC n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I819_9FIRM
Protein translocase subunit yajC {ECO:0000313|EMBL:AHF24414.1}; TaxID=1393505 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig1761.;"
protein translocase subunit yajC
L3_106_000M1_scaffold_802_6
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4254..5381)
DNA (1128bp) protein (376aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IBA8_9FIRM
L3_106_000M1_scaffold_802_7
unknown

Not on your lists

comp(5431..6243)
DNA (813bp) protein (271aa)

This feature has no annotations

L3_106_000M1_scaffold_802_8
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6243..6950)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KQL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS48491.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
L3_106_000M1_scaffold_802_9
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7217..8590)
DNA (1374bp) protein (458aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
asnS; Asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IBZ6_9FIRM
L3_106_000M1_scaffold_802_10
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8681..9565)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DYT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCO08112.1}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam5 = DSM 18033.;"
hypothetical protein
L3_106_000M1_scaffold_802_11
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9909..12518)
DNA (2610bp) protein (870aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IC49_9FIRM
L3_106_000M1_scaffold_802_12
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12631..14598)
DNA (1968bp) protein (656aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7ICP1_9FIRM
L3_106_000M1_scaffold_802_13
unknown

Not on your lists

comp(14622..14951)
DNA (330bp) protein (110aa)

This feature has no annotations

L3_106_000M1_scaffold_802_14
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15111..16043)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I6P4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE46928.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_106_000M1_scaffold_802_15
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16222..16728)
DNA (507bp) protein (169aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IFW6_9FIRM
L3_106_000M1_scaffold_802_16
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17105..19420)
DNA (2316bp) protein (772aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EDN01110.1}; EC=1.17.4.2 {ECO:0000313|EMBL:EDN01110.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ribonucleoside-triphosphate reductase catalytic subunit (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NS72_9FIRM
L3_106_000M1_scaffold_802_17
unknown

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comp(19589..20239)
DNA (651bp) protein (217aa)

This feature has no annotations

L3_106_000M1_scaffold_802_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20317..20958)
DNA (642bp) protein (214aa)
Acetyltransferase (isoleucine patch superfamily) (EC:2.3.1.18)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00035C337E
Uncharacterized protein {ECO:0000313|EMBL:EHM92666.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_106_000M1_scaffold_802_19
unknown

Not on your lists

21024..21584
DNA (561bp) protein (187aa)

This feature has no annotations

L3_106_000M1_scaffold_802_20
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22100..22990)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I489_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE46266.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
CRISPR-associated protein, Csd2 family
L3_106_000M1_scaffold_802_21
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22983..24779)
DNA (1797bp) protein (599aa)
CRISPR-associated protein Csd1 family n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I3T3_9FIRM
CRISPR-associated protein Csd1 family {ECO:0000313|EMBL:CDE46265.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
CRISPR-associated protein, Csd1 family
L3_106_000M1_scaffold_802_22
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24776..25420)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I321_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE46264.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_106_000M1_scaffold_802_23
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25846..28020)
DNA (2175bp) protein (725aa)
CRISPR-associated helicase Cas3 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I4W4_9FIRM
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:CDE46263.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
CRISPR-associated helicase Cas3
L3_106_000M1_scaffold_802_24
unknown

Not on your lists

comp(27963..28115)
DNA (153bp) protein (51aa)

This feature has no annotations

L3_106_000M1_scaffold_802_25
unknown

Not on your lists

comp(28354..28455)
DNA (102bp) protein (34aa)

This feature has no annotations

L3_106_000M1_scaffold_802_26
unknown

Not on your lists

comp(29158..29352)
DNA (195bp) protein (65aa)

This feature has no annotations

L3_106_000M1_scaffold_802_27
Halobacillus sp. BAB-2008, Halobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29384..30280)
DNA (897bp) protein (299aa)
Periplasmic-binding protein n=1 Tax=Halobacillus sp. BAB-2008 RepID=L5NC78_9BACI
Periplasmic-binding protein {ECO:0000313|EMBL:ELK48050.1}; TaxID=1246484 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Halobacillus.;" source="Halobacillus sp. BAB-2008.;"
periplasmic-binding protein
L3_106_000M1_scaffold_802_28
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30376..31278)
DNA (903bp) protein (301aa)
Pretoxin HINT domain protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AI86_9CLOT
Pretoxin HINT domain protein {ECO:0000313|EMBL:CDA51683.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
hypothetical protein
L3_106_000M1_scaffold_802_29
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31540..33477)
DNA (1938bp) protein (646aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Lysyl-tRNA synthetase (class II) (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJ83_9FIRM
L3_106_000M1_scaffold_802_30
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33509..33991)
DNA (483bp) protein (161aa)
Transcription elongation factor GreA n=3 Tax=Peptostreptococcus RepID=D3MQ68_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
transcription elongation factor GreA
Displaying items 1-30 of 52 in total

View Taxonomy