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L3_106_000M1_scaffold_1328

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Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_1328_1
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(95..1405)
DNA (1311bp) protein (437aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LIB7_TREBD
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:AEE16158.1}; Flags: Precursor;; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
L3_106_000M1_scaffold_1328_2
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(1402..1995)
DNA (594bp) protein (198aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RVQ3_SPHGB
tripartite ATP-independent periplasmic transporter DctQ component
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ADY13045.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
L3_106_000M1_scaffold_1328_3
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(2145..3161)
DNA (1017bp) protein (339aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RVQ4_SPHGB
TRAP dicarboxylate transporter subunit DctP
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:ADY13046.1}; Flags: Precursor;; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
L3_106_000M1_scaffold_1328_4
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(3375..4685)
DNA (1311bp) protein (437aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LIB7_TREBD
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:AEE16158.1}; Flags: Precursor;; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
L3_106_000M1_scaffold_1328_5
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(4682..5302)
DNA (621bp) protein (207aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RVQ3_SPHGB
tripartite ATP-independent periplasmic transporter DctQ component
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ADY13045.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
L3_106_000M1_scaffold_1328_6
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5903..7126)
DNA (1224bp) protein (408aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
6-phosphofructokinase (EC:2.7.1.11)
Phosphofructokinase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R179_9FIRM
L3_106_000M1_scaffold_1328_7
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7314..8918)
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M4T3_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EST52895.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
dppE; dipeptide-binding protein DppE
L3_106_000M1_scaffold_1328_8
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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9221..10144
DNA (924bp) protein (308aa)
Peptide ABC transporter permease n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M2Q5_9BACL
Peptide ABC transporter permease {ECO:0000313|EMBL:EST52899.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
binding-protein-dependent transport system inner membrane protein
L3_106_000M1_scaffold_1328_9
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10158..11069
DNA (912bp) protein (304aa)
Diguanylate cyclase n=1 Tax=Brevibacillus panacihumi W25 RepID=V6MBY3_9BACL
Diguanylate cyclase {ECO:0000313|EMBL:EST52898.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
oppC; oligopeptide transport system permease protein OppC
L3_106_000M1_scaffold_1328_10
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11283..12284
DNA (1002bp) protein (334aa)
Peptide ABC transporter ATP-binding protein n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M3I1_9BACL
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EST52897.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
hypothetical protein
L3_106_000M1_scaffold_1328_11
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12281..13249
DNA (969bp) protein (323aa)
Peptide ABC transporter ATP-binding protein n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M2P6_9BACL
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EST52896.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
oligopeptide/dipeptide ABC transporter ATPase subunit
L3_106_000M1_scaffold_1328_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13571..14350)
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IFY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59629.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
spermidine/putrescine ABC transporter ATP-binding protein
L3_106_000M1_scaffold_1328_13
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14390..15439)
DNA (1050bp) protein (350aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IFY5_9CLOT
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:ETP73257.1}; Flags: Precursor;; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
ABC transporter substrate-binding protein
L3_106_000M1_scaffold_1328_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15458..16495)
DNA (1038bp) protein (346aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IFY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59627.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
spermidine/putrescine ABC transporter ATP-binding protein
L3_106_000M1_scaffold_1328_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16511..17368)
DNA (858bp) protein (286aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IFY3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59626.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC transporter, permease protein
L3_106_000M1_scaffold_1328_16
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17499..18812)
DNA (1314bp) protein (438aa)
Amidohydrolase family protein n=2 Tax=Clostridium RepID=E9SLM0_CLOSY
Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:ETP73260.1}; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
Cytosine deaminase and related metal-dependent hydrolases
L3_106_000M1_scaffold_1328_17
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18809..20095)
DNA (1287bp) protein (429aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IFY8_9CLOT
Amidohydrolase {ECO:0000313|EMBL:ETP73261.1}; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
amidohydrolase
L3_106_000M1_scaffold_1328_18
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20271..21197
DNA (927bp) protein (309aa)
Sugar kinases ribokinase family n=2 Tax=Clostridium RepID=R5LWE1_9CLOT
Sugar kinases ribokinase family {ECO:0000313|EMBL:CCY81719.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Sugar kinases, ribokinase family
L3_106_000M1_scaffold_1328_19
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21607..22584
DNA (978bp) protein (326aa)
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GSE4_9FIRM
tripartite ATP-independent periplasmic transporter solute receptor, DctP family
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family {ECO:0000313|EMBL:CBL40726.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_106_000M1_scaffold_1328_20
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22672..23163
DNA (492bp) protein (164aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Clostridium sp. CAG:81 RepID=R5G4Y1_9CLOT
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:CCY12380.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
tripartite ATP-independent periplasmic transporter DctQ
L3_106_000M1_scaffold_1328_21
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23163..24431
DNA (1269bp) protein (423aa)
TRAP transporter, DctM subunit n=2 Tax=Clostridiales RepID=D7GSE3_9FIRM
TRAP transporter, DctM subunit
TRAP transporter, DctM subunit {ECO:0000313|EMBL:CBL40725.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_106_000M1_scaffold_1328_22
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24698..26080
DNA (1383bp) protein (461aa)
MATE efflux family protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CPM2_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:CDA78633.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
putative efflux protein, MATE family
L3_106_000M1_scaffold_1328_23
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26238..26810)
DNA (573bp) protein (191aa)
4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R890_9FIRM
4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein {ECO:0000313|EMBL:CDF46283.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein
L3_106_000M1_scaffold_1328_24
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28060..28992)
DNA (933bp) protein (311aa)
Transporter, auxin efflux carrier (AEC) family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EKT3_9FIRM
Transporter, auxin efflux carrier (AEC) family protein {ECO:0000313|EMBL:EEQ58205.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Predicted permeases
L3_106_000M1_scaffold_1328_25
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29078..29962)
DNA (885bp) protein (295aa)
aldolase n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003615987
autoinducer 2 aldolase
Tax=BJP_IG2069_Clostridiales_48_15
L3_106_000M1_scaffold_1328_26
Oribacterium asaccharolyticum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30097..31164)
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=Oribacterium sp. ACB7 RepID=G9WWW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL09295.1}; TaxID=796944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium asaccharolyticum ACB7.;"
Periplasmic binding protein domain containing protein
L3_106_000M1_scaffold_1328_27
Oribacterium asaccharolyticum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31234..32256)
DNA (1023bp) protein (341aa)
Putative uncharacterized protein n=1 Tax=Oribacterium sp. ACB7 RepID=G9WWW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL09296.1}; TaxID=796944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium asaccharolyticum ACB7.;"
lsrD; autoinducer 2 import system permease protein LsrD
L3_106_000M1_scaffold_1328_28
Oribacterium sp. oral taxon 108, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32253..33254)
DNA (1002bp) protein (334aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Oribacterium sp. oral taxon 108 str. F0425 RepID=F5T4E8_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EGL37428.1}; TaxID=904296 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 108 str. F0425.;"
ABC-type transporter, integral membrane subunit
L3_106_000M1_scaffold_1328_29
Oribacterium asaccharolyticum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33260..34777)
DNA (1518bp) protein (506aa)
Monosaccharide-transporting ATPase (EC:3.6.3.17)
Putative uncharacterized protein n=1 Tax=Oribacterium sp. ACB7 RepID=G9WWW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL09298.1}; TaxID=796944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium asaccharolyticum ACB7.;"
L3_106_000M1_scaffold_1328_30
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35037..35963
DNA (927bp) protein (309aa)
Sugar-binding domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H9Z0_9CLOT
Sugar-binding domain protein {ECO:0000313|EMBL:EJF42123.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
lsrR; transcriptional regulator LsrR
Displaying items 1-30 of 40 in total

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