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L3_106_000M1_scaffold_2653

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_2653_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(326..5221)
DNA (4896bp) protein (1632aa)
Repeat protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PS97_9FIRM
Repeat protein {ECO:0000313|EMBL:EFB74382.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_106_000M1_scaffold_2653_2
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5233..6330)
DNA (1098bp) protein (366aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I5A8_9FIRM
L3_106_000M1_scaffold_2653_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6327..6917)
DNA (591bp) protein (197aa)
Transcriptional regulator TetR family n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LYZ2_9FIRM
Transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCO04314.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_106_000M1_scaffold_2653_4
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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7322..7672
DNA (351bp) protein (117aa)
DRTGG domain protein id=3473885 bin=GWF2_Clostridiales_38_85 species=Anaerotruncus colihominis genus=Anaerotruncus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
DRTGG domain.
Tax=GWF2_Clostridiales_38_85_curated
L3_106_000M1_scaffold_2653_5
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7716..8093
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GKA6_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO35853.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_106_000M1_scaffold_2653_6
Thermoanaerobacter brockii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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8134..9540
DNA (1407bp) protein (469aa)
Fe-S cluster domain protein n=2 Tax=Thermoanaerobacter RepID=B0KAF0_THEP3
Fe-S cluster domain-containing protein
Fe-S cluster domain protein {ECO:0000313|EMBL:ADV80064.1}; TaxID=509193 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter brockii subsp. finnii (strain ATCC 43586 / DSM 3389; / AKO-1) (Thermoanaerobacter finnii).;"
L3_106_000M1_scaffold_2653_7
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

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9537..9884
DNA (348bp) protein (116aa)
AraC family transcriptional regulator n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E30504
AraC family transcriptional regulator {ECO:0000313|EMBL:EYE89187.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
DRTGG domain-containing protein
L3_106_000M1_scaffold_2653_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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9881..10594
DNA (714bp) protein (238aa)
PHP protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VMC1_9CLOT
PHP protein {ECO:0000313|EMBL:ENY91614.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Predicted metal-dependent phosphoesterases (PHP family)
L3_106_000M1_scaffold_2653_9
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10741..11211
DNA (471bp) protein (157aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TID3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65435.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
NAD(P)-dependent iron-only hydrogenase diaphorase component iron-sulfur protein
L3_106_000M1_scaffold_2653_10
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11223..11780
DNA (558bp) protein (186aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6H0_9CLOT
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_106_000M1_scaffold_2653_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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11777..12145
DNA (369bp) protein (123aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YUN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM42024.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
NAD(P)-dependent iron-only hydrogenase iron-sulfur protein
L3_106_000M1_scaffold_2653_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12173..13969
DNA (1797bp) protein (599aa)
hndC; NADP-reducing hydrogenase subunit HndC (EC:1.12.1.3)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7F0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX51228.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_106_000M1_scaffold_2653_13
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13996..15735
DNA (1740bp) protein (580aa)
fhbC; FhbC (EC:1.6.5.3)
Fe only hydrogenase 1 {ECO:0000313|EMBL:AGC67942.1}; EC=1.12.7.2 {ECO:0000313|EMBL:AGC67942.1};; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
Fe only hydrogenase 1 n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VMG5_CLOSH
L3_106_000M1_scaffold_2653_14
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15892..17958)
DNA (2067bp) protein (689aa)
Alpha-galactosidase {ECO:0000313|EMBL:EMS71498.1}; EC=3.2.1.22 {ECO:0000313|EMBL:EMS71498.1};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
Alpha-galactosidase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FSL1_9CLOT
glycoside hydrolase family protein
L3_106_000M1_scaffold_2653_15
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18297..19409
DNA (1113bp) protein (371aa)
Penicillin V acylase-like amidase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WC25_9FIRM
Penicillin V acylase-like amidase {ECO:0000313|EMBL:CDD04394.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
Penicillin V acylase-like amidase
L3_106_000M1_scaffold_2653_16
Shuttleworthia satelles, Shuttleworthia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19606..19806)
DNA (201bp) protein (67aa)
putative aminoglycoside N3'-acetyltransferase (EC:2.3.1.81)
aminoglycoside N(3'''')-acetyltransferase n=1 Tax=Butyrivibrio sp. XPD2006 RepID=UPI0003B61A7F
Aminoglycoside 3-N-acetyltransferase {ECO:0000313|EMBL:EEP28434.1}; TaxID=626523 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Shuttleworthia.;" source="Shuttleworthia satelles DSM 14600.;"
L3_106_000M1_scaffold_2653_17

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comp(19884..20588)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1TMS1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC74447.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_106_000M1_scaffold_2653_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20689..21039)
DNA (351bp) protein (117aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZI80_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EFQ07125.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Signal transduction histidine kinase
L3_106_000M1_scaffold_2653_19
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21650..23185
DNA (1536bp) protein (512aa)
transposase n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B704BA
Uncharacterized protein {ECO:0000313|EMBL:CDA53180.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
IS transposase
Displaying 19 items

View Taxonomy