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L3_106_000M1_scaffold_3013

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_3013_1
unknown

Not on your lists

2..196
DNA (195bp) protein (65aa)

This feature has no annotations

L3_106_000M1_scaffold_3013_2
unknown

Not on your lists

230..751
DNA (522bp) protein (174aa)

This feature has no annotations

L3_106_000M1_scaffold_3013_3
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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848..1213
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KLV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS47454.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
L3_106_000M1_scaffold_3013_4
unknown

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1185..1595
DNA (411bp) protein (137aa)

This feature has no annotations

L3_106_000M1_scaffold_3013_5
unknown

Not on your lists

1609..2463
DNA (855bp) protein (285aa)

This feature has no annotations

L3_106_000M1_scaffold_3013_6
unknown

Not on your lists

2460..2861
DNA (402bp) protein (134aa)

This feature has no annotations

L3_106_000M1_scaffold_3013_7
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3039..3497
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D7A9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG52775.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_106_000M1_scaffold_3013_8
unknown

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comp(3520..3969)
DNA (450bp) protein (150aa)

This feature has no annotations

L3_106_000M1_scaffold_3013_9
unknown

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4297..4455
DNA (159bp) protein (53aa)

This feature has no annotations

L3_106_000M1_scaffold_3013_10
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4492..6120
DNA (1629bp) protein (543aa)
resolvase n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B679C9
Uncharacterized protein {ECO:0000313|EMBL:CDE17931.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_106_000M1_scaffold_3013_11
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6393..6611)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N9H4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS79748.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
small acid-soluble spore protein alpha/beta type
L3_106_000M1_scaffold_3013_12
unknown

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6989..7819
DNA (831bp) protein (277aa)

This feature has no annotations

L3_106_000M1_scaffold_3013_13
unknown

Not on your lists

7911..8732
DNA (822bp) protein (274aa)

This feature has no annotations

L3_106_000M1_scaffold_3013_14
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

8908..9627
DNA (720bp) protein (240aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LSH2_9FIRM
L3_106_000M1_scaffold_3013_15
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9624..10922
DNA (1299bp) protein (433aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
Adenylosuccinate lyase n=1 Tax=Clostridium ultunense Esp RepID=M1Z5V0_9CLOT
adenylosuccinate lyase
L3_106_000M1_scaffold_3013_16

Not on your lists

11103..11906
DNA (804bp) protein (268aa)
Uncharacterized protein {ECO:0000313|EMBL:AHF25249.1}; TaxID=1393628 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig90.;"
L3_106_000M1_scaffold_3013_17
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11997..12272
DNA (276bp) protein (92aa)
Sporulation protein YqfC n=7 Tax=Clostridium thermocellum RepID=A3DEC6_CLOTH
sporulation protein YqfC
Sporulation protein YqfC {ECO:0000313|EMBL:ABN52305.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_106_000M1_scaffold_3013_18
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12269..13405
DNA (1137bp) protein (379aa)
Sporulation protein YqfD n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I8P6_9FIRM
Sporulation protein YqfD {ECO:0000313|EMBL:CDE47866.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
sporulation protein YqfD
L3_106_000M1_scaffold_3013_19
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13434..14444
DNA (1011bp) protein (337aa)
PhoH family protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IBI5_9FIRM
PhoH family protein {ECO:0000313|EMBL:CDE47867.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
PhoH family protein
L3_106_000M1_scaffold_3013_20
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14407..16578
DNA (2172bp) protein (724aa)
7TM receptor with intracellular metal dependent phosphohydrolase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I9B9_9FIRM
7TM receptor with intracellular metal dependent phosphohydrolase {ECO:0000313|EMBL:CDE47868.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
HD superfamily hydrolase
L3_106_000M1_scaffold_3013_21
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16575..17075
DNA (501bp) protein (167aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Endoribonuclease YbeY n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I7N6_9FIRM
hypothetical protein
L3_106_000M1_scaffold_3013_22
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17081..17470
DNA (390bp) protein (130aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Endoribonuclease YbeY n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I7N6_9FIRM
cytidine deaminase
L3_106_000M1_scaffold_3013_23
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17494..18396
DNA (903bp) protein (301aa)
GTPase Era n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I8D5_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
GTP-binding protein Era
L3_106_000M1_scaffold_3013_24
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18561..19658
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I5L9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE46766.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_106_000M1_scaffold_3013_25
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19671..20828
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I5L9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE46766.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_106_000M1_scaffold_3013_26
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20925..21059
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J2C6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS28335.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
Displaying 26 items

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