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L3_106_000M1_scaffold_3200

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_3200_1
R_OD1_Yanofskybacteria_41_21, Yanofskybacteria, Parcubacteria, Bacteria

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comp(197..1498)
DNA (1302bp) protein (434aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_41_21_curated
L3_106_000M1_scaffold_3200_2
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1834..3018
DNA (1185bp) protein (395aa)
class I and II aminotransferase (EC:2.6.1.1)
Aminotransferase class I and II n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IF48_9FIRM
Aminotransferase class I and II {ECO:0000313|EMBL:CDE50429.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_106_000M1_scaffold_3200_3
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

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3516..5768
DNA (2253bp) protein (751aa)
formate acetyltransferase 1 (EC:2.3.1.54)
Formate acetyltransferase n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BB07_9FIRM
Formate acetyltransferase {ECO:0000313|EMBL:CDD62789.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
L3_106_000M1_scaffold_3200_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5755..6510
DNA (756bp) protein (252aa)
pyruvate formate-lyase 1-activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053, ECO:0000313|EMBL:CBK99802.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0K3_9FIRM
L3_106_000M1_scaffold_3200_5
unknown

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6705..8045
DNA (1341bp) protein (447aa)

This feature has no annotations

L3_106_000M1_scaffold_3200_6
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8077..9525
DNA (1449bp) protein (483aa)
sugar transferase (EC:2.4.1.-)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Blautia sp. CAG:52 RepID=R6GHT2_9FIRM
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:CDB20841.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
L3_106_000M1_scaffold_3200_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9752..10900)
DNA (1149bp) protein (383aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S7V4_9FIRM
Signal transduction histidine kinase
L3_106_000M1_scaffold_3200_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10897..11574)
DNA (678bp) protein (226aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGT6_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EFQ07529.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_106_000M1_scaffold_3200_9
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11705..11848
DNA (144bp) protein (48aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R5GJ03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY72609.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
hypothetical protein
L3_106_000M1_scaffold_3200_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11832..12737
DNA (906bp) protein (302aa)
4Fe-4S binding domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S7V9_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDP22564.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_106_000M1_scaffold_3200_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12734..13663
DNA (930bp) protein (310aa)
Redoxin family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S7W0_9FIRM
Redoxin family protein {ECO:0000313|EMBL:EDP22565.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Peroxiredoxin
L3_106_000M1_scaffold_3200_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13701..14813
DNA (1113bp) protein (371aa)
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase (EC:1.8.4.11 1.8.4.12)
Methionine-S-sulfoxide reductase n=3 Tax=Clostridiales RepID=E7GME1_CLOSY
Methionine-S-sulfoxide reductase {ECO:0000313|EMBL:EGA94067.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_106_000M1_scaffold_3200_13
unknown

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14993..15553
DNA (561bp) protein (187aa)

This feature has no annotations

L3_106_000M1_scaffold_3200_14
unknown

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15595..16749
DNA (1155bp) protein (385aa)

This feature has no annotations

L3_106_000M1_scaffold_3200_15
unknown

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16904..18046
DNA (1143bp) protein (381aa)

This feature has no annotations

L3_106_000M1_scaffold_3200_16
unknown

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18060..19139
DNA (1080bp) protein (360aa)

This feature has no annotations

L3_106_000M1_scaffold_3200_17
unknown

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19153..19908
DNA (756bp) protein (252aa)

This feature has no annotations

Displaying 17 items

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