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L3_106_000M1_scaffold_5413

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_5413_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(177..1091)
DNA (915bp) protein (305aa)
AP endonuclease, family 2 n=1 Tax=Clostridium sp. MSTE9 RepID=J1H3H5_9CLOT
AP endonuclease, family 2 {ECO:0000313|EMBL:EJF40065.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
xylose isomerase domain-containing protein TIM barrel
L3_106_000M1_scaffold_5413_2
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1414..2349
DNA (936bp) protein (312aa)
Periplasmic binding protein and sugar binding domain of the LacI family protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H354_9CLOT
Periplasmic binding protein and sugar binding domain of the LacI family protein {ECO:0000313|EMBL:EJF39945.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Periplasmic binding protein domain containing protein
L3_106_000M1_scaffold_5413_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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2449..3927
DNA (1479bp) protein (493aa)
Putative sugar ABC transporter, ATP binding protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YMJ3_9FIRM
Putative sugar ABC transporter, ATP binding protein {ECO:0000313|EMBL:EHM54071.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ABC transporter
L3_106_000M1_scaffold_5413_4
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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3953..4990
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3JNS1_TRESO
Uncharacterized protein {ECO:0000313|EMBL:EPF26710.1}; TaxID=1125701 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. paredis ATCC 35535.;"
inner-membrane translocator
L3_106_000M1_scaffold_5413_5
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5005..6045
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KJL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY66948.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
Predicted dehydrogenases and related proteins
L3_106_000M1_scaffold_5413_6
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6063..6878
DNA (816bp) protein (272aa)
AP endonuclease, family 2 n=1 Tax=Clostridium sp. MSTE9 RepID=J1H4J5_9CLOT
AP endonuclease, family 2 {ECO:0000313|EMBL:EJF40128.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L3_106_000M1_scaffold_5413_7
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6891..7859
DNA (969bp) protein (323aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0WU43_9CLOT
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EJF39896.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
oxidoreductase domain protein
L3_106_000M1_scaffold_5413_8
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8097..8561)
DNA (465bp) protein (155aa)
Putative transposase for insertion sequence element n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KVU3_OSCVS
putative transposase for insertion sequence element
Putative transposase for insertion sequence element {ECO:0000313|EMBL:BAK98165.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_106_000M1_scaffold_5413_9
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8769..9314
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SGF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52188.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L3_106_000M1_scaffold_5413_10
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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9483..10880
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E382_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA91026.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
Predicted ATPase (AAA+ superfamily)
L3_106_000M1_scaffold_5413_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10981..11256
DNA (276bp) protein (92aa)
Relaxase/Mobilization nuclease domain protein n=1 Tax=human gut metagenome RepID=K1UCV5_9ZZZZ
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EDP20637.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Relaxase/Mobilisation nuclease domain.
Displaying 11 items

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