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L3_106_008G1_scaffold_11

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Displaying items 1-30 of 210 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_008G1_scaffold_11_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..382
DNA (381bp) protein (127aa)
DNA repair protein RadC n=2 Tax=Escherichia coli RepID=E9Y310_ECOLX
DNA repair protein, RadC family
Uncharacterized protein {ECO:0000313|EMBL:ENA26904.1}; TaxID=1116113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE007_MS-11.;"
L3_106_008G1_scaffold_11_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

469..690
DNA (222bp) protein (74aa)
Uncharacterized protein n=203 Tax=Enterobacteriaceae RepID=A7ZRC4_ECO24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHV53664.1}; TaxID=868161 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC6B.;"
L3_106_008G1_scaffold_11_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

770..1138
DNA (369bp) protein (123aa)
Antitoxin of the YeeV-YeeU toxin-antitoxin system CP4-44 prophage n=5 Tax=Escherichia coli RepID=B7LDN9_ECO55
yeeU; antitoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage
YeeU protein {ECO:0000313|EMBL:CAV01934.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain 55989 / EAEC).;"
L3_106_008G1_scaffold_11_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1228..1605
DNA (378bp) protein (126aa)
Toxin CbtA n=23 Tax=Escherichia coli RepID=M9JID4_ECOLX
phage protein
PF06755 family protein {ECO:0000313|EMBL:EIH10784.1}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0259.;"
L3_106_008G1_scaffold_11_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1602..2090
DNA (489bp) protein (163aa)
Uncharacterized protein n=28 Tax=Escherichia coli RepID=B1LDM0_ECOSM
hypothetical protein
YeeW protein {ECO:0000313|EMBL:CAV01938.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain 55989 / EAEC).;"
L3_106_008G1_scaffold_11_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2110..2307
DNA (198bp) protein (66aa)
Uncharacterized protein n=38 Tax=Escherichia coli RepID=B7LDP2_ECO55
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB15702.1}; TaxID=439855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SMS-3-5 / SECEC).;"
L3_106_008G1_scaffold_11_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2392..2538
DNA (147bp) protein (49aa)
Uncharacterized protein n=31 Tax=Escherichia coli RepID=B7LDP3_ECO55
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGP22286.1}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli PCN033.;"
L3_106_008G1_scaffold_11_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3002..4075
DNA (1074bp) protein (358aa)
Prophage P4 integrase n=54 Tax=Escherichia coli RepID=G7RCD4_ECOC2
prophage P4 integrase
Phage integrase {ECO:0000313|EMBL:ESK00059.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
L3_106_008G1_scaffold_11_9
Yersinia rohdei, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4318..7389)
DNA (3072bp) protein (1024aa)
Uncharacterized protein n=83 Tax=Escherichia coli RepID=G7RCD5_ECOC2
hypothetical protein
DEAD/DEAH box helicase family protein {ECO:0000313|EMBL:AJJ10358.1}; TaxID=29485 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia rohdei.;"
L3_106_008G1_scaffold_11_10
Shewanella decolorationis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7403..9415)
DNA (2013bp) protein (671aa)
Uncharacterized protein n=94 Tax=Escherichia coli RepID=G7RCD6_ECOC2
hypothetical protein
Type iii dna modification methyltransferase {ECO:0000313|EMBL:ESE41781.1}; TaxID=1353536 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella decolorationis S12.;"
L3_106_008G1_scaffold_11_11
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9568..10005)
DNA (438bp) protein (146aa)
Uncharacterized protein n=94 Tax=Escherichia coli RepID=G7RCD8_ECOC2
hypothetical protein
Helicase UvrD {ECO:0000313|EMBL:AJP47362.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
L3_106_008G1_scaffold_11_12
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10002..10703)
DNA (702bp) protein (234aa)
Uncharacterized protein n=97 Tax=Escherichia coli RepID=E1PG25_ECOAB
hypothetical protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AJP47363.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
L3_106_008G1_scaffold_11_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10700..13978)
DNA (3279bp) protein (1093aa)
DEAD/DEAH box helicase-like protein n=93 Tax=Escherichia coli RepID=E1PG26_ECOAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW05421.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
L3_106_008G1_scaffold_11_14
Yersinia rohdei, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13978..14883)
DNA (906bp) protein (302aa)
Uncharacterized protein n=97 Tax=Escherichia coli RepID=E1PG27_ECOAB
hypothetical protein
WYL domain protein {ECO:0000313|EMBL:AJJ10176.1}; TaxID=29485 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia rohdei.;"
L3_106_008G1_scaffold_11_15
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15052..15303)
DNA (252bp) protein (84aa)
Uncharacterized protein n=94 Tax=Escherichia coli RepID=E1PG28_ECOAB
hypothetical protein
Putative inner membrane protein {ECO:0000313|EMBL:CDL15655.1}; TaxID=1432553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS46.;"
L3_106_008G1_scaffold_11_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15597..16310
DNA (714bp) protein (238aa)
Uncharacterized protein n=47 Tax=Escherichia coli RepID=G7RCE3_ECOC2
hypothetical protein
Membrane protein {ECO:0000313|EMBL:EZA37369.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
L3_106_008G1_scaffold_11_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16294..16965)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Escherichia coli HVH 144 (4-4451937) RepID=T7EIV1_ECOLX
putative transposase
Uncharacterized protein {ECO:0000313|EMBL:ELJ73970.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L3_106_008G1_scaffold_11_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17624..17953
DNA (330bp) protein (110aa)
Uncharacterized protein n=95 Tax=Escherichia coli RepID=E1PG32_ECOAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEN62381.1}; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C3.;"
L3_106_008G1_scaffold_11_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18712..19692)
DNA (981bp) protein (327aa)
Uncharacterized protein YjhS n=90 Tax=Escherichia coli RepID=E1PG33_ECOAB
hypothetical protein
Putative 9-O-acetyl-N-acetylneuraminate esterase {ECO:0000313|EMBL:EHU04569.1}; TaxID=868134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1B.;"
L3_106_008G1_scaffold_11_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19757..20863)
DNA (1107bp) protein (369aa)
N-acetylneuraminate epimerase 2 {ECO:0000255|HAMAP-Rule:MF_01195}; EC=5.1.3.24 {ECO:0000255|HAMAP-Rule:MF_01195};; N-acetylneuraminate mutarotase 2 {ECO:0000255|HAMAP-Rule:MF_01195}; Short=Neu5Ac mutarotase 2 {ECO:0000255|HAMAP-Rule:MF_01195};; Sialic acid epimerase 2 {ECO:0000255|HAMAP-Rule:MF_01195}; Flags: Precursor;; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
N-acetylneuraminate epimerase 2 n=90 Tax=Escherichia coli RepID=NANM2_ECOL6
hypothetical protein
L3_106_008G1_scaffold_11_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20883..21599)
DNA (717bp) protein (239aa)
Probable N-acetylneuraminic acid outer membrane channel protein NanC n=92 Tax=Escherichia coli RepID=NANC_ECOL6
yjhA; hypothetical protein
Probable N-acetylneuraminic acid outer membrane channel protein NanC; Short=Porin NanC;; Flags: Precursor;; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
L3_106_008G1_scaffold_11_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23064..23666
DNA (603bp) protein (201aa)
FimB protein n=202 Tax=Escherichia RepID=Q47221_ECOLX
fimB; type 1 fimbriae regulatory protein FimB
Type 1 fimbriae regulatory protein fimB {ECO:0000313|EMBL:ELE59494.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
L3_106_008G1_scaffold_11_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24144..24740
DNA (597bp) protein (199aa)
Type 1 fimbriae regulatory protein FimE n=840 Tax=Enterobacteriaceae RepID=FIME_ECOL6
fimE; tyrosine recombinase/inversion of on/off regulator of FimA
Tyrosine recombinase/inversion of on/off regulator of fimA {ECO:0000313|EMBL:AIF62311.1}; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B7A.;"
L3_106_008G1_scaffold_11_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25221..25769
DNA (549bp) protein (183aa)
Type-1 fimbrial protein, A chain n=85 Tax=Escherichia coli RepID=G7RCF3_ECOC2
fimA; Type-1 fimbrial protein, A chain precursor
Type-1 fimbrial protein, A chain {ECO:0000313|EMBL:ESD40676.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L3_106_008G1_scaffold_11_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25876..26373
DNA (498bp) protein (166aa)
Fimbrin-like protein fimI n=82 Tax=Escherichia coli RepID=G7RCF4_ECOC2
fimI; fimbrin-like protein fimI
Fimbrial protein {ECO:0000313|EMBL:ESD40675.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L3_106_008G1_scaffold_11_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26410..27135
DNA (726bp) protein (242aa)
Chaperone protein FimC n=115 Tax=Escherichia coli RepID=FIMC_ECOL6
type I fimbrial chaperone
Chaperone protein FimC {ECO:0000313|EMBL:EGI12989.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L3_106_008G1_scaffold_11_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27201..29837
DNA (2637bp) protein (879aa)
Outer membrane usher protein fimD n=79 Tax=Escherichia coli RepID=G7RCF6_ECOC2
fimD; Outer membrane usher protein fimD precursor
Outer membrane usher protein fimD {ECO:0000313|EMBL:EIF87163.1}; TaxID=656421 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M919.;"
L3_106_008G1_scaffold_11_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29847..30377
DNA (531bp) protein (177aa)
FimF n=208 Tax=Escherichia RepID=O87737_ECOLX
FimF protein
Fimbrial protein FimF {ECO:0000313|EMBL:ETE21304.1}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
L3_106_008G1_scaffold_11_29
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30390..30893
DNA (504bp) protein (168aa)
Minor fimbrial subunit n=122 Tax=Escherichia RepID=Q65A11_ECOLX
fimG; FimG protein
FimG protein {ECO:0000313|EMBL:CDC84529.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L3_106_008G1_scaffold_11_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30913..31815
DNA (903bp) protein (301aa)
FimH protein n=43 Tax=Escherichia coli RepID=G7RD48_ECOC2
fimH; FimH protein
Type 1 fimbrial adhesin {ECO:0000313|EMBL:ACZ17656.1}; Flags: Fragment;; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Displaying items 1-30 of 210 in total

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