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L3_106_038G1_scaffold_31

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Displaying items 1-30 of 110 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_038G1_scaffold_31_1
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..348
DNA (348bp) protein (116aa)
Putative uncharacterized protein (Fragment) n=7 Tax=Clostridium clostridioforme RepID=G5HX77_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61871.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
L3_106_038G1_scaffold_31_2
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

459..1934
DNA (1476bp) protein (492aa)
Stage IV sporulation protein A {ECO:0000256|PIRNR:PIRNR007466}; EC=3.6.1.3 {ECO:0000256|PIRNR:PIRNR007466};; Coat morphogenetic protein SpoIVA {ECO:0000256|PIRNR:PIRNR007466}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Stage IV sporulation protein A n=9 Tax=Clostridium RepID=G5HX78_9CLOT
stage IV sporulation protein A
L3_106_038G1_scaffold_31_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2095..3702
DNA (1608bp) protein (536aa)
Metallo-beta-lactamase n=8 Tax=Clostridium RepID=N9WWG8_9CLOT
Metallo-beta-lactamase {ECO:0000313|EMBL:ENZ68730.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Predicted exonuclease of the beta-lactamase fold involved in RNA processing
L3_106_038G1_scaffold_31_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3730..4212
DNA (483bp) protein (161aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Ribonuclease H (EC:3.1.26.4)
Ribonuclease H n=9 Tax=Clostridium RepID=G5HX80_9CLOT
L3_106_038G1_scaffold_31_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4427..5386
DNA (960bp) protein (320aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9VJJ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ68728.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_106_038G1_scaffold_31_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5569..8217
DNA (2649bp) protein (883aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Alanine--tRNA ligase n=5 Tax=Clostridium clostridioforme RepID=N9YGQ9_9CLOT
alanyl-tRNA synthetase
L3_106_038G1_scaffold_31_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8640..9206)
DNA (567bp) protein (189aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WTH1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ68726.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_106_038G1_scaffold_31_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9263..11008)
DNA (1746bp) protein (582aa)
Fibronectin-binding A protein n=9 Tax=Clostridium RepID=N9WWH5_9CLOT
Fibronectin-binding A protein {ECO:0000313|EMBL:ENZ68725.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
fibronectin-binding A domain-containing protein
L3_106_038G1_scaffold_31_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11309..12187
DNA (879bp) protein (293aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9VK75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ68724.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
YicC domain-containing protein
L3_106_038G1_scaffold_31_10
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12184..12867
DNA (684bp) protein (228aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=9 Tax=Clostridium RepID=G5HX86_9CLOT
L3_106_038G1_scaffold_31_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12912..13175
DNA (264bp) protein (88aa)
DNA-directed RNA polymerase, omega subunit (EC:2.7.7.6)
DNA-directed RNA polymerase, omega subunit n=9 Tax=Clostridium RepID=N9X575_9CLOT
DNA-directed RNA polymerase, omega subunit {ECO:0000313|EMBL:ENZ17708.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_106_038G1_scaffold_31_12
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13270..14625
DNA (1356bp) protein (452aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
SSU ribosomal protein S12P methylthiotransferase (EC:1.3.1.74 2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=9 Tax=Clostridium RepID=G5HX88_9CLOT
L3_106_038G1_scaffold_31_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14609..15151
DNA (543bp) protein (181aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=8 Tax=Clostridium RepID=G5HX89_9CLOT
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:ENZ68720.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_106_038G1_scaffold_31_14
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15153..16397
DNA (1245bp) protein (415aa)
Putative competence-damage inducible protein n=8 Tax=Clostridium RepID=G5HX90_9CLOT
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
competence/damage-inducible protein CinA
L3_106_038G1_scaffold_31_15
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16460..17800
DNA (1341bp) protein (447aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9VJK0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25839.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L3_106_038G1_scaffold_31_16
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17889..18188
DNA (300bp) protein (100aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9X580_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25838.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L3_106_038G1_scaffold_31_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18185..19234
DNA (1050bp) protein (350aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WTI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ68716.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_106_038G1_scaffold_31_18
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19319..19747
DNA (429bp) protein (143aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9WWI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64857.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Sporulation protein YtfJ
L3_106_038G1_scaffold_31_19
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19817..19954
DNA (138bp) protein (46aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VK83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25835.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
hypothetical protein
L3_106_038G1_scaffold_31_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20171..20356)
DNA (186bp) protein (62aa)
50S ribosomal protein L28 n=17 Tax=Clostridium RepID=G5HXA6_9CLOT
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
50S ribosomal protein L28
L3_106_038G1_scaffold_31_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20526..20882
DNA (357bp) protein (119aa)
Uncharacterized protein n=18 Tax=Clostridium RepID=A8RUE4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ10606.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_106_038G1_scaffold_31_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20896..22620
DNA (1725bp) protein (575aa)
DAK2 domain fusion protein YloV n=8 Tax=Clostridium RepID=N9WTI6_9CLOT
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:ENZ68711.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
DAK2 domain fusion protein YloV
L3_106_038G1_scaffold_31_23
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22863..23567
DNA (705bp) protein (235aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9WWJ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25831.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Integral membrane protein, interacts with FtsH
L3_106_038G1_scaffold_31_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23695..24663
DNA (969bp) protein (323aa)
Glucokinase n=8 Tax=Clostridium RepID=N9VK88_9CLOT
Glucokinase {ECO:0000313|EMBL:ENZ68709.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ROK family protein
L3_106_038G1_scaffold_31_25
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24788..25660
DNA (873bp) protein (291aa)
Fructokinase n=8 Tax=Clostridium RepID=N9VJK9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25829.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
ROK family protein
L3_106_038G1_scaffold_31_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25684..27741
DNA (2058bp) protein (686aa)
ATP-dependent DNA helicase RecG n=9 Tax=Clostridium RepID=G5HXB2_9CLOT
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:ENZ17678.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ATP-dependent DNA helicase RecG
L3_106_038G1_scaffold_31_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27805..28320
DNA (516bp) protein (172aa)
Nitroreductase n=9 Tax=Clostridium RepID=N9WTJ0_9CLOT
Nitroreductase {ECO:0000313|EMBL:ENZ68706.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Nitroreductase
L3_106_038G1_scaffold_31_28
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28464..28667)
DNA (204bp) protein (68aa)
Uncharacterized protein n=18 Tax=Clostridium RepID=A8RUD6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64867.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
alpha/beta type small acid-soluble spore protein
L3_106_038G1_scaffold_31_29
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28888..29082
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JQ23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64868.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
L3_106_038G1_scaffold_31_30
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29064..29258
DNA (195bp) protein (65aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=R6K156_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64869.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Displaying items 1-30 of 110 in total

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