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L3_106_079G1_scaffold_33

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Displaying items 1-30 of 102 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_079G1_scaffold_33_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(124..669)
DNA (546bp) protein (182aa)
Protoporphyrinogen IX dehydrogenase [menaquinone] n=736 Tax=Enterobacteriaceae RepID=HEMG_ECO57
hemG; protoporphyrinogen oxidase
Protoporphyrinogen IX dehydrogenase {ECO:0000313|EMBL:EHU17820.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L3_106_079G1_scaffold_33_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(681..2132)
DNA (1452bp) protein (484aa)
Trk system potassium uptake protein n=387 Tax=Escherichia RepID=E2QI42_ECOLX
trkH; Trk system potassium uptake protein trkH
Trk system potassium uptake protein {ECO:0000256|PIRNR:PIRNR006247}; TaxID=868134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1B.;"
L3_106_079G1_scaffold_33_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2171..2785)
DNA (615bp) protein (205aa)
Potassium uptake protein n=658 Tax=Enterobacteriaceae RepID=C3SJX2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMX35013.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
L3_106_079G1_scaffold_33_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2785..4116)
DNA (1332bp) protein (444aa)
pepQ; proline dipeptidase (EC:3.4.13.9)
Xaa-Pro dipeptidase {ECO:0000255|HAMAP-Rule:MF_01279}; Short=X-Pro dipeptidase {ECO:0000255|HAMAP-Rule:MF_01279};; EC=3.4.13.9 {ECO:0000255|HAMAP-Rule:MF_01279};; Imidodipeptidase {ECO:0000255|HAMAP-Rule:MF_01279}; Proline dipeptidase {ECO:0000255|HAMAP-Rule:MF_01279}; Short=Prolidase {ECO:0000255|HAMAP-Rule:MF_01279};; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
Xaa-Pro dipeptidase n=301 Tax=Escherichia RepID=PEPQ_ECO27
L3_106_079G1_scaffold_33_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4306..6495
DNA (2190bp) protein (730aa)
Fatty acid oxidation complex subunit alpha {ECO:0000255|HAMAP-Rule:MF_01621}; Includes:; Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase {ECO:0000255|HAMAP-Rule:MF_01621}; EC=4.2.1.17 {ECO:0000255|HAMAP-Rule:MF_01621};; EC=5.1.2.3 {ECO:0000255|HAMAP-Rule:MF_01621};; EC=5.3.3.8 {ECO:0000255|HAMAP-Rule:MF_01621};; Includes:; 3-hydroxyacyl-CoA dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01621}; EC=1.1.1.35 {ECO:0000255|HAMAP-Rule:MF_01621};; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
Fatty acid oxidation complex subunit alpha n=105 Tax=Escherichia coli RepID=FADB_ECOL6
fadB; multifunctional fatty acid oxidation complex
L3_106_079G1_scaffold_33_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6505..7668
DNA (1164bp) protein (388aa)
fadA; 3-ketoacyl-CoA thiolase (EC:2.3.1.16)
3-ketoacyl-CoA thiolase {ECO:0000255|HAMAP-Rule:MF_01620}; EC=2.3.1.16 {ECO:0000255|HAMAP-Rule:MF_01620};; Acetyl-CoA acyltransferase {ECO:0000255|HAMAP-Rule:MF_01620}; Beta-ketothiolase {ECO:0000255|HAMAP-Rule:MF_01620}; Fatty acid oxidation complex subunit beta {ECO:0000255|HAMAP-Rule:MF_01620}; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
3-ketoacyl-CoA thiolase n=113 Tax=Escherichia coli RepID=FADA_ECOL6
L3_106_079G1_scaffold_33_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7860..8561)
DNA (702bp) protein (234aa)
FMN reductase domain protein {ECO:0000313|EMBL:EHV52303.1}; EC=1.5.1.- {ECO:0000313|EMBL:EHV52303.1};; TaxID=868160 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC6A.;"
NAD(P)H-flavin reductase n=1191 Tax=Enterobacteriaceae RepID=FRE_ECO57
fre; NAD(P)H-flavin reductase
L3_106_079G1_scaffold_33_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8607..10100)
DNA (1494bp) protein (498aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011098}; EC=4.1.1.- {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011102};; Polyprenyl p-hydroxybenzoate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01636}; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.1.;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=813 Tax=Enterobacteriaceae RepID=UBID_ECOL6
ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
L3_106_079G1_scaffold_33_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10267..10755
DNA (489bp) protein (163aa)
Transcription antitermination protein RfaH n=397 Tax=Escherichia RepID=RFAH_ECOL5
rfaH; transcriptional activator RfaH
Transcription antitermination protein RfaH {ECO:0000256|HAMAP-Rule:MF_00951}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
L3_106_079G1_scaffold_33_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10752..11534)
DNA (783bp) protein (261aa)
Tat-linked quality control protein TatD n=137 Tax=Escherichia coli RepID=E1P9S0_ECOAB
yigW; DNase TatD
Tat-linked quality control protein TatD {ECO:0000256|HAMAP-Rule:MF_00901}; Deoxyribonuclease TatD {ECO:0000256|HAMAP-Rule:MF_00901}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L3_106_079G1_scaffold_33_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11576..12352)
DNA (777bp) protein (259aa)
Sec-independent protein translocase protein TatC n=378 Tax=Escherichia RepID=TATC_ECOL6
twin-arginine protein translocation system subunit TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L3_106_079G1_scaffold_33_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12355..12870)
DNA (516bp) protein (172aa)
Sec-independent protein translocase protein TatB n=304 Tax=Escherichia RepID=TATB_ECOL5
tatB; sec-independent translocase
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=1280976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 25 (4-5851939).;"
L3_106_079G1_scaffold_33_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12874..13143)
DNA (270bp) protein (90aa)
Sec-independent protein translocase protein TatA n=1283 Tax=Enterobacteriaceae RepID=TATA_ECO57
tatA; twin arginine translocase protein A
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
L3_106_079G1_scaffold_33_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13222..14862)
DNA (1641bp) protein (547aa)
Probable protein kinase UbiB {ECO:0000255|HAMAP-Rule:MF_00414}; EC=2.7.-.- {ECO:0000255|HAMAP-Rule:MF_00414};; Ubiquinone biosynthesis protein UbiB {ECO:0000255|HAMAP-Rule:MF_00414}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
Probable protein kinase UbiB n=374 Tax=Enterobacteriaceae RepID=UBIB_ECO45
ubiB; putative ubiquinone biosynthesis protein UbiB
L3_106_079G1_scaffold_33_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14859..15464)
DNA (606bp) protein (202aa)
Uncharacterized protein n=264 Tax=Escherichia coli RepID=G7R6V3_ECOC2
yigP; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW92977.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L3_106_079G1_scaffold_33_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15478..16233)
DNA (756bp) protein (252aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000255|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000255|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000255|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000255|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000255|HAMAP-Rule:MF_01813}; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=381 Tax=Escherichia RepID=UBIE_ECO45
ubiE; ubiquinone/menaquinone biosynthesis protein
L3_106_079G1_scaffold_33_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16328..17755)
DNA (1428bp) protein (476aa)
DNA recombination protein RmuC n=165 Tax=Escherichia coli RepID=B1LM20_ECOSM
yigN; DNA recombination protein RmuC
DNA recombination protein rmuC {ECO:0000313|EMBL:KEL67856.1}; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
L3_106_079G1_scaffold_33_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17972..18739
DNA (768bp) protein (256aa)
Transcriptional regulator n=130 Tax=Escherichia coli RepID=E1P925_ECOAB
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EOW92974.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L3_106_079G1_scaffold_33_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18763..19767
DNA (1005bp) protein (335aa)
2-dehydro-3-deoxygalactonokinase n=112 Tax=Escherichia coli RepID=E1P924_ECOAB
hypothetical protein
2-dehydro-3-deoxygalactonokinase {ECO:0000313|EMBL:EQP44453.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_106_079G1_scaffold_33_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19757..20386
DNA (630bp) protein (210aa)
2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=124 Tax=Escherichia coli RepID=G7R6U7_ECOC2
2-dehydro-3-deoxy-6-phosphogalactonate aldolase
2-dehydro-3-deoxy-6-phosphogalactonate aldolase {ECO:0000313|EMBL:EQP44452.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_106_079G1_scaffold_33_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20411..21385
DNA (975bp) protein (325aa)
Periplasmic binding protein n=132 Tax=Escherichia coli RepID=E1P922_ECOAB
hypothetical protein
Periplasmic binding protein {ECO:0000313|EMBL:EMD06341.1}; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli SEPT362.;"
L3_106_079G1_scaffold_33_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21402..21908
DNA (507bp) protein (169aa)
Uncharacterized protein n=363 Tax=Escherichia RepID=C6EF69_ECOBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW02900.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
L3_106_079G1_scaffold_33_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21921..23411
DNA (1491bp) protein (497aa)
Conserved membrane protein n=251 Tax=Escherichia RepID=A1AI15_ECOK1
hypothetical protein
Integral membrane protein {ECO:0000313|EMBL:CKI37538.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_106_079G1_scaffold_33_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23446..24210)
DNA (765bp) protein (255aa)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
Uridine phosphorylase n=75 Tax=Escherichia coli RepID=G7R6U3_ECOC2
udp; uridine phosphorylase
L3_106_079G1_scaffold_33_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24472..25281
DNA (810bp) protein (270aa)
Carboxymethylenebutenolidase n=330 Tax=Escherichia RepID=E2QI19_ECOLX
ysgA; putative hydrolase
Carboxymethylenebutenolidase {ECO:0000313|EMBL:EQX24562.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L3_106_079G1_scaffold_33_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25312..25407)
DNA (96bp) protein (32aa)
Uncharacterized protein n=384 Tax=Escherichia RepID=B1LM10_ECOSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU22926.1}; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2A.;"
L3_106_079G1_scaffold_33_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25538..26206
DNA (669bp) protein (223aa)
Isochorismatase family protein n=287 Tax=Escherichia RepID=B1LM08_ECOSM
isochorismatase hydrolase
Isochorismatase {ECO:0000313|EMBL:EOV69245.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_106_079G1_scaffold_33_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26212..27072
DNA (861bp) protein (287aa)
Uncharacterized protein n=237 Tax=Escherichia RepID=B7MHA9_ECO45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQX24559.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L3_106_079G1_scaffold_33_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27167..28726
DNA (1560bp) protein (520aa)
YahF/FdrA-like protein n=121 Tax=Escherichia coli RepID=E1P915_ECOAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP44443.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_106_079G1_scaffold_33_30
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28672..30147
DNA (1476bp) protein (492aa)
Uncharacterized protein n=74 Tax=Escherichia coli RepID=G7R646_ECOC2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC77536.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
Displaying items 1-30 of 102 in total

View Taxonomy