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L3_106_079G1_scaffold_38

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Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_079G1_scaffold_38_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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167..550
DNA (384bp) protein (128aa)
Uncharacterized protein (Fragment) n=1 Tax=Escherichia coli MS 185-1 RepID=D8C9R1_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP43767.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_106_079G1_scaffold_38_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(614..1057)
DNA (444bp) protein (148aa)
Uncharacterized acetyltransferase yjaB n=166 Tax=Escherichia coli RepID=E2QJ34_ECOLX
yjaB; putative acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:EHU03479.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
L3_106_079G1_scaffold_38_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1214..2143
DNA (930bp) protein (310aa)
metA; homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
Homoserine O-succinyltransferase n=348 Tax=Escherichia RepID=META_ECO27
L3_106_079G1_scaffold_38_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2412..4013
DNA (1602bp) protein (534aa)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Malate synthase n=109 Tax=Escherichia coli RepID=G7R8Q3_ECOC2
aceB; malate synthase
L3_106_079G1_scaffold_38_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4043..5347
DNA (1305bp) protein (435aa)
Isocitrate lyase {ECO:0000313|EMBL:KEN85131.1}; EC=4.1.3.1 {ECO:0000313|EMBL:KEN85131.1};; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
Isocitrate lyase n=972 Tax=Enterobacteriaceae RepID=ACEA_ECOL6
isocitrate lyase
L3_106_079G1_scaffold_38_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5563..7287
DNA (1725bp) protein (575aa)
Isocitrate dehydrogenase kinase/phosphatase {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063056}; Short=IDH kinase/phosphatase {ECO:0000256|HAMAP-Rule:MF_00747};; Short=IDHK/P {ECO:0000256|HAMAP-Rule:MF_00747};; EC=2.7.11.5 {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063055};; EC=3.1.3.- {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063053};; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase protein (EC:2.7.11.5)
Isocitrate dehydrogenase kinase/phosphatase n=270 Tax=Escherichia RepID=ACEK_ECO45
L3_106_079G1_scaffold_38_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7304..8128)
DNA (825bp) protein (275aa)
Acetate operon repressor n=254 Tax=Escherichia RepID=E2QJ39_ECOLX
IclR family transcriptional regulator
Acetate operon repressor {ECO:0000313|EMBL:EQP43773.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_106_079G1_scaffold_38_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8328..12011
DNA (3684bp) protein (1228aa)
metH; B12-dependent methionine synthase (EC:2.1.1.13)
Methionine synthase n=161 Tax=Escherichia coli RepID=E2QJ40_ECOLX
Methionine synthase {ECO:0000313|EMBL:EQP43774.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_106_079G1_scaffold_38_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12071..12391
DNA (321bp) protein (107aa)
Uncharacterized protein n=225 Tax=Escherichia RepID=B7MJ01_ECO45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQX23432.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L3_106_079G1_scaffold_38_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12434..12883
DNA (450bp) protein (150aa)
Uncharacterized protein n=118 Tax=Escherichia coli RepID=E1PBL6_ECOAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU17153.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L3_106_079G1_scaffold_38_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13054..14685
DNA (1632bp) protein (544aa)
Uncharacterized protein yjbB n=340 Tax=Enterobacteriaceae RepID=E2QJ43_ECOLX
yjbB; hypothetical protein
Sodium-dependent inorganic phosphate (Pi) transporter {ECO:0000313|EMBL:ELG93803.1}; TaxID=1182725 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE146.;"
L3_106_079G1_scaffold_38_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14775..15464)
DNA (690bp) protein (230aa)
Peptidase E {ECO:0000255|HAMAP-Rule:MF_00510}; EC=3.4.13.21 {ECO:0000255|HAMAP-Rule:MF_00510};; Alpha-aspartyl dipeptidase {ECO:0000255|HAMAP-Rule:MF_00510}; Asp-specific dipeptidase {ECO:0000255|HAMAP-Rule:MF_00510}; Dipeptidase E {ECO:0000255|HAMAP-Rule:MF_00510}; TaxID=362663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:K15:H31 (strain 536 / UPEC).;"
Peptidase E n=181 Tax=Enterobacteriaceae RepID=PEPE_ECOL5
pepE; peptidase E
L3_106_079G1_scaffold_38_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15846..17075)
DNA (1230bp) protein (410aa)
L-sorbose 1-phosphate reductase {ECO:0000313|EMBL:AJO86112.1}; Putative L-sorbose 1-phosphate reductase {ECO:0000313|EMBL:CKH40628.1}; EC=1.1.1.- {ECO:0000313|EMBL:CKH40628.1};; EC=1.1.1.14 {ECO:0000313|EMBL:CKH40628.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L-sorbose 1-phosphate reductase n=112 Tax=Escherichia coli RepID=E1PBL9_ECOAB
putative oxidoreductase
L3_106_079G1_scaffold_38_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17127..17951)
DNA (825bp) protein (275aa)
PTS system, mannose-specific IID component n=340 Tax=Escherichia RepID=E2QJ46_ECOLX
sorbose permease IID component
Sorbose permease IID component {ECO:0000313|EMBL:CAR10692.1}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
L3_106_079G1_scaffold_38_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17962..18759)
DNA (798bp) protein (266aa)
Sorbose PTS component (Sorbose-permease PTS system IIC component) n=410 Tax=Escherichia RepID=E2QJ47_ECOLX
fructose permease IIC component
PTS system, mannose/fructose/sorbose family, IIC component {ECO:0000313|EMBL:EOV68792.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_106_079G1_scaffold_38_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18825..19319)
DNA (495bp) protein (165aa)
PTS system, sorbose-specific IIB component n=481 Tax=Enterobacteriaceae RepID=A1AIJ6_ECOK1
sorbose-specific phosphotransferase enzyme IIB component
Putative uncharacterized protein {ECO:0000313|EMBL:EFF14486.2}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B354.;"
L3_106_079G1_scaffold_38_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19319..19726)
DNA (408bp) protein (136aa)
Sorbose PTS component (Sorbose-permease PTS system IIA component) n=193 Tax=Escherichia coli RepID=E2QJ49_ECOLX
sorbose PTS component
PTS system sorbose-specific IIA component {ECO:0000313|EMBL:EQP43783.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_106_079G1_scaffold_38_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19736..20542)
DNA (807bp) protein (269aa)
Sorbitol-6-phosphate2-dehydrogenase n=117 Tax=Escherichia coli RepID=E2QJ50_ECOLX
sorbitol-6-phosphate 2-dehydrogenase
Sorbitol-6-phosphate2-dehydrogenase {ECO:0000313|EMBL:ETJ11809.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
L3_106_079G1_scaffold_38_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20612..21559)
DNA (948bp) protein (316aa)
Sorbitol operon regulator n=11 Tax=Escherichia coli RepID=V0RMM2_ECOLX
transcriptional regulator of sorbose uptake and utilization genes
Sorbitol/sorbose operon activator {ECO:0000313|EMBL:CAR10841.2}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
L3_106_079G1_scaffold_38_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21907..22779
DNA (873bp) protein (291aa)
yjbC; 23S rRNA pseudouridine synthase F (EC:4.2.1.70)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
Ribosomal large subunit pseudouridine synthase F n=309 Tax=Escherichia coli RepID=RLUF_ECOL6
L3_106_079G1_scaffold_38_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22780..23052)
DNA (273bp) protein (91aa)
Uncharacterized protein n=986 Tax=Enterobacteriaceae RepID=C3SHW2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEN62663.1}; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C3.;"
L3_106_079G1_scaffold_38_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23305..24654)
DNA (1350bp) protein (450aa)
lysC; aspartate kinase (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
Aspartokinase n=460 Tax=Escherichia RepID=E2QJ54_ECOLX
L3_106_079G1_scaffold_38_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25179..26828
DNA (1650bp) protein (550aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=868137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1E.;"
Glucose-6-phosphate isomerase n=8 Tax=Escherichia coli RepID=D7Z546_ECOLX
L3_106_079G1_scaffold_38_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27326..27568
DNA (243bp) protein (81aa)
Uncharacterized protein YjbE n=1213 Tax=Enterobacteriaceae RepID=YJBE_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESA95144.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_106_079G1_scaffold_38_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27755..28393
DNA (639bp) protein (213aa)
YjbF n=150 Tax=Escherichia coli RepID=F4U1X9_ECOLX
yjbF; putative lipoprotein
Lipoprotein {ECO:0000313|EMBL:EOU66712.1}; TaxID=1169343 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE24.;"
L3_106_079G1_scaffold_38_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28390..29127
DNA (738bp) protein (246aa)
Uncharacterized protein n=192 Tax=Escherichia coli RepID=B7N2N5_ECO81
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU49612.1}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
L3_106_079G1_scaffold_38_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29127..31223
DNA (2097bp) protein (699aa)
Lipoprotein yjbH n=129 Tax=Escherichia coli RepID=G7R8S5_ECOC2
yjbH; lipoprotein yjbH precursor
Porin {ECO:0000313|EMBL:ELJ65617.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L3_106_079G1_scaffold_38_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31608..31766
DNA (159bp) protein (53aa)
Uncharacterized protein n=166 Tax=Escherichia coli RepID=C2DTK2_ECOLX
hypothetical protein
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Uncharacterized protein {ECO:0000313|EMBL:CDN84875.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
L3_106_079G1_scaffold_38_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31763..32173
DNA (411bp) protein (137aa)
Protein PsiE n=1003 Tax=Enterobacteriaceae RepID=PSIE_ECO24
psiF; Phosphate starvation inducible protein
Protein PsiE {ECO:0000256|HAMAP-Rule:MF_01048}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
L3_106_079G1_scaffold_38_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32267..33157)
DNA (891bp) protein (297aa)
Maltose transport system permease protein MalG n=1267 Tax=Enterobacteriaceae RepID=MALG_ECO57
malG; Maltose/maltodextrin ABC transporter permease MalG
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEN85151.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
Displaying items 1-30 of 91 in total

View Taxonomy