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L3_106_079G1_scaffold_154

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_079G1_scaffold_154_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..746
DNA (744bp) protein (248aa)
PfkB carbohydrate kinase family protein n=9 Tax=Clostridium difficile RepID=T2TW68_CLODI
PfkB carbohydrate kinase family protein {ECO:0000313|EMBL:EQG76657.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
scrK; fructokinase
L3_106_079G1_scaffold_154_2
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

764..2425
DNA (1662bp) protein (554aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=2 Tax=root RepID=R6CGB2_9FIRM
L3_106_079G1_scaffold_154_3
unknown

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2492..2938
DNA (447bp) protein (149aa)

This feature has no annotations

L3_106_079G1_scaffold_154_4
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3023..4219)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01421.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_106_079G1_scaffold_154_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4403..4588
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QNU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY29674.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_106_079G1_scaffold_154_6
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

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4803..5078
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PKW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC24993.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
Ion channel.
L3_106_079G1_scaffold_154_7
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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comp(5171..7147)
DNA (1977bp) protein (659aa)
UPI0002EA1F62 related cluster n=1 Tax=unknown RepID=UPI0002EA1F62
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit {ECO:0000313|EMBL:CCX40947.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
L3_106_079G1_scaffold_154_8
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7166..8650)
DNA (1485bp) protein (495aa)
Putative transporter n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L0P8_OSCVS
putative transporter
Putative transporter {ECO:0000313|EMBL:BAK99076.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_106_079G1_scaffold_154_9
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8685..10160)
DNA (1476bp) protein (492aa)
Sodium/proton antiporter ShaA n=1 Tax=Clostridium sp. CAG:505 RepID=R7AQT9_9CLOT
Sodium/proton antiporter ShaA {ECO:0000313|EMBL:CDD60735.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
putative transporter
L3_106_079G1_scaffold_154_10
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10197..11717)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZLW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ13554.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
putative transporter
L3_106_079G1_scaffold_154_11
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11717..12088)
DNA (372bp) protein (124aa)
Na(+)/H(+) antiporter subunit C n=2 Tax=Firmicutes RepID=R6QS09_9FIRM
Na(+)/H(+) antiporter subunit C {ECO:0000313|EMBL:CDD60733.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
putative transporter
L3_106_079G1_scaffold_154_12
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12091..13104)
DNA (1014bp) protein (338aa)
UPI0002F0617A related cluster n=1 Tax=unknown RepID=UPI0002F0617A
Uncharacterized protein {ECO:0000313|EMBL:CDD60732.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Multisubunit Na+/H+ antiporter, MnhB subunit
L3_106_079G1_scaffold_154_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13097..13348)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48126.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_106_079G1_scaffold_154_14
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13345..13662)
DNA (318bp) protein (106aa)
Multisubunit Na+/H+ antiporter, MnhG subunit n=1 Tax=Coprococcus catus GD/7 RepID=D4J7U6_9FIRM
Multisubunit Na+/H+ antiporter, MnhG subunit
Multisubunit Na+/H+ antiporter, MnhG subunit {ECO:0000313|EMBL:CBK80417.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_106_079G1_scaffold_154_15
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13655..14023)
DNA (369bp) protein (123aa)
Multisubunit Na+/H+ antiporter, MnhF subunit n=1 Tax=Coprococcus catus GD/7 RepID=D4J7U5_9FIRM
Multisubunit Na+/H+ antiporter, MnhF subunit
Multisubunit Na+/H+ antiporter, MnhF subunit {ECO:0000313|EMBL:CBK80416.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_106_079G1_scaffold_154_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14023..14487)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WZ99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92847.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Multisubunit Na+/H+ antiporter, MnhE subunit
L3_106_079G1_scaffold_154_17
unknown

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comp(14534..14689)
DNA (156bp) protein (52aa)

This feature has no annotations

L3_106_079G1_scaffold_154_18
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15239..15865
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Sporolactobacillus vineae RepID=UPI00028A409C
Uncharacterized protein {ECO:0000313|EMBL:EEF67243.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_106_079G1_scaffold_154_19
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15945..16940)
DNA (996bp) protein (332aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VNX2_9CLOT
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:EDO62953.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
transcriptional regulator
L3_106_079G1_scaffold_154_20
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17196..18239)
DNA (1044bp) protein (348aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
GPD1; Glyceraldehyde-3-phosphate dehydrogenase 1 (EC:1.2.1.12)
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Clostridium sporosphaeroides RepID=UPI00035E20AF
L3_106_079G1_scaffold_154_21
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18484..18912)
DNA (429bp) protein (143aa)
Ferritin-like protein n=3 Tax=Erysipelotrichaceae RepID=B0N0T9_9FIRM
Ferritin-like protein {ECO:0000313|EMBL:EDS19975.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Ferritin Dps family protein
L3_106_079G1_scaffold_154_22
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19093..20496)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H6U5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF41008.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_106_079G1_scaffold_154_23
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20532..21899)
DNA (1368bp) protein (456aa)
Citrate synthase n=2 Tax=Clostridium RepID=A7VPM9_9CLOT
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Citrate synthase
L3_106_079G1_scaffold_154_24
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22167..23312
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003650CB8
Stage II sporulation protein D {ECO:0000313|EMBL:EJF41042.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
stage II sporulation protein D
L3_106_079G1_scaffold_154_25
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23365..24696)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N2G0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC05235.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L3_106_079G1_scaffold_154_26
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24827..26827)
DNA (2001bp) protein (667aa)
MORN repeat protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTI7_9CLOT
MORN repeat protein {ECO:0000313|EMBL:EDO61483.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L3_106_079G1_scaffold_154_27
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27073..28050
DNA (978bp) protein (326aa)
Transporter, small conductance mechanosensitive ion channel MscS family protein n=2 Tax=Clostridium RepID=A7VTI5_9CLOT
Transporter small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:CDC05231.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Small-conductance mechanosensitive channel
L3_106_079G1_scaffold_154_28
unknown

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comp(28089..28268)
DNA (180bp) protein (60aa)

This feature has no annotations

L3_106_079G1_scaffold_154_29
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28411..28914
DNA (504bp) protein (168aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=2 Tax=Clostridium RepID=A7VRE2_9CLOT
hypothetical protein
L3_106_079G1_scaffold_154_30
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29028..30224
DNA (1197bp) protein (399aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
pgk; Phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Clostridium sp. MSTE9 RepID=J0N2N2_9CLOT
Displaying items 1-30 of 34 in total

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