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L3_106_079G1_scaffold_258

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_079G1_scaffold_258_1
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..351)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9ME47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68966.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Plasmid stabilisation system protein.
L3_106_079G1_scaffold_258_2
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(311..613)
DNA (303bp) protein (101aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=R6NCS7_9FIRM
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:ERI96825.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
RelB/DinJ family addiction module antitoxin
L3_106_079G1_scaffold_258_3
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1210..1524)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=3 Tax=unclassified Lachnospiraceae RepID=E5XHD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19282.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_106_079G1_scaffold_258_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1502..2017)
DNA (516bp) protein (172aa)
SrtB family sortase n=2 Tax=Lachnospiraceae RepID=V8C0X2_RUMGN
SrtB family sortase {ECO:0000313|EMBL:ETD20391.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_106_079G1_scaffold_258_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1974..6359)
DNA (4386bp) protein (1462aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYY0_RUMGN
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EDN78985.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Cna protein B-type domain.
L3_106_079G1_scaffold_258_6
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6414..6911)
DNA (498bp) protein (166aa)
AIG2-like family protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2EUS6_9FIRM
AIG2-like family protein {ECO:0000313|EMBL:ERI96821.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
AIG2-like family.
L3_106_079G1_scaffold_258_7
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6921..7883)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2DJ65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI96820.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Putative amidoligase enzyme.
L3_106_079G1_scaffold_258_8
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7890..9209)
DNA (1320bp) protein (440aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Cytosine-specific methyltransferase n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JRF7_9FIRM
Putative DNA (cytosine-5-)-methyltransferase
L3_106_079G1_scaffold_258_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9260..9808)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYY5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78991.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_106_079G1_scaffold_258_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9964..10239)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYY7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78992.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
plasmid segregation centromere-binding protein ParR
L3_106_079G1_scaffold_258_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10236..11144)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYY8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78993.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
plasmid segregation actin-type ATPase ParM
L3_106_079G1_scaffold_258_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11255..11572)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C052_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN42461.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_106_079G1_scaffold_258_13
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11634..12035)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2D1Z4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI96814.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_106_079G1_scaffold_258_14
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12151..12390
DNA (240bp) protein (80aa)
Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Blautia sp. KLE 1732 RepID=U2DKA0_9FIRM
Toxin-antitoxin system, antitoxin component, Xre family {ECO:0000313|EMBL:ERI96813.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Helix-turn-helix.
L3_106_079G1_scaffold_258_15
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12616..12870
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2EPV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI96812.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Helix-turn-helix.
L3_106_079G1_scaffold_258_16
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12903..13562)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=3 Tax=unclassified Lachnospiraceae RepID=E5XHD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88267.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_106_079G1_scaffold_258_17
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13583..14071)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000368CCBA
Uncharacterized protein {ECO:0000313|EMBL:EGN34986.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
L3_106_079G1_scaffold_258_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14333..14839)
DNA (507bp) protein (169aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=A7B7Z2_RUMGN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA82788.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_106_079G1_scaffold_258_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14882..15826)
DNA (945bp) protein (315aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Lachnospiraceae RepID=A7B7Z3_RUMGN
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_106_079G1_scaffold_258_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15823..16491)
DNA (669bp) protein (223aa)
Response regulator receiver domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FMI5_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEA82790.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_106_079G1_scaffold_258_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16564..17082)
DNA (519bp) protein (173aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=V8C2D2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20906.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
signaling protein
L3_106_079G1_scaffold_258_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17045..17323)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7B7Z8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20907.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_106_079G1_scaffold_258_23
unknown

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comp(17386..17451)
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 23 items

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