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L3_106_079G1_scaffold_270

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_079G1_scaffold_270_1
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39..779
DNA (741bp) protein (247aa)
MATE efflux family protein n=5 Tax=root RepID=B0G699_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDR46660.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
putative efflux protein, MATE family
L3_106_079G1_scaffold_270_2
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(910..1098)
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0G698_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98298.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_106_079G1_scaffold_270_3
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1098..1538)
DNA (441bp) protein (147aa)
Sigma-70, region 4 n=5 Tax=root RepID=B0G697_9FIRM
Sigma-70, region 4 {ECO:0000313|EMBL:EDR46658.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
Sigma-70, region 4.
L3_106_079G1_scaffold_270_4
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1952..2281
DNA (330bp) protein (110aa)
DNA-binding helix-turn-helix protein n=6 Tax=root RepID=B0G696_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23074.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Helix-turn-helix.
L3_106_079G1_scaffold_270_5
unknown

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comp(2305..2412)
DNA (108bp) protein (36aa)

This feature has no annotations

L3_106_079G1_scaffold_270_6
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2432..2803)
DNA (372bp) protein (124aa)
Uncharacterized protein n=5 Tax=root RepID=B0G695_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23073.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_106_079G1_scaffold_270_7
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2808..3746)
DNA (939bp) protein (313aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=U2ETX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23072.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
plasmid segregation actin-type ATPase ParM
L3_106_079G1_scaffold_270_8
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3964..4464
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=V8C8K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23071.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L3_106_079G1_scaffold_270_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4614..5207
DNA (594bp) protein (198aa)
RNA polymerase factor sigma-70 n=2 Tax=Ruminococcus RepID=R6NXY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23070.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
RNA polymerase sigma factor
L3_106_079G1_scaffold_270_10
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5179..5985
DNA (807bp) protein (269aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0G691_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23069.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_106_079G1_scaffold_270_11
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6563..6979)
DNA (417bp) protein (139aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0G687_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98309.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_106_079G1_scaffold_270_12
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7042..7824)
DNA (783bp) protein (261aa)
Sortase, SrtB family n=4 Tax=Clostridiales RepID=B0G686_9FIRM
Sortase, SrtB family {ECO:0000313|EMBL:ERI98310.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
sortase B. Cysteine peptidase. MEROPS family C60B
L3_106_079G1_scaffold_270_13
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7821..9041)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0G685_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98311.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
CHC2 zinc finger.
L3_106_079G1_scaffold_270_14
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9096..10043)
DNA (948bp) protein (316aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=V8C7M9_9FIRM
Putative phage head-tail adaptor {ECO:0000313|EMBL:ERI98312.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_106_079G1_scaffold_270_15
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10127..12364)
DNA (2238bp) protein (746aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
RecD/TraA family helicase (EC:3.1.11.5)
Helicase, RecD/TraA family n=4 Tax=root RepID=B0G683_9FIRM
L3_106_079G1_scaffold_270_16
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12416..13456)
DNA (1041bp) protein (347aa)
YqaJ viral recombinase family protein n=4 Tax=Clostridiales RepID=B0G682_9FIRM
YqaJ viral recombinase family protein {ECO:0000313|EMBL:ERI98314.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
putative phage-type endonuclease
L3_106_079G1_scaffold_270_17
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13468..14607)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=5 Tax=root RepID=B0G681_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98315.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_106_079G1_scaffold_270_18
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15006..15200)
DNA (195bp) protein (65aa)
Uncharacterized protein n=5 Tax=root RepID=B0G679_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23058.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_106_079G1_scaffold_270_19
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15387..15704
DNA (318bp) protein (106aa)
DNA-binding helix-turn-helix protein n=3 Tax=Lachnospiraceae RepID=B0G678_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG88229.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Helix-turn-helix.
L3_106_079G1_scaffold_270_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16037..16774)
DNA (738bp) protein (246aa)
Integrase core domain protein n=9 Tax=Clostridiales RepID=T2TYW9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EGN41771.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Transposase and inactivated derivatives
Displaying 20 items

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