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L3_106_079G1_scaffold_303

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_079G1_scaffold_303_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1213)
DNA (1212bp) protein (404aa)
Efflux ABC transporter, permease protein n=3 Tax=Lachnospiraceae RepID=A7AYZ6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49671.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC-type transport system, involved in lipoprotein release, permease component
L3_106_079G1_scaffold_303_2
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1288..1629)
DNA (342bp) protein (114aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
histidine kinase, putative (EC:2.7.3.-)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TSJ4_9FIRM
L3_106_079G1_scaffold_303_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1626..2648)
DNA (1023bp) protein (341aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZ04_RUMGN
integral membrane sensor signal transduction histidine kinase
L3_106_079G1_scaffold_303_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2632..3303)
DNA (672bp) protein (224aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZ56_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49673.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_106_079G1_scaffold_303_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3433..4293)
DNA (861bp) protein (287aa)
EDD domain protein, DegV family n=3 Tax=Lachnospiraceae RepID=A7AZ00_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49674.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
EDD domain protein, DegV family
L3_106_079G1_scaffold_303_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4310..5674)
DNA (1365bp) protein (455aa)
UPF0210 protein RUMGNA_00516 n=3 Tax=Lachnospiraceae RepID=A7AZ01_RUMGN
UPF0210 protein HMPREF0991_00009 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_106_079G1_scaffold_303_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5702..5974)
DNA (273bp) protein (91aa)
UPF0237 protein RUMGNA_00517 n=3 Tax=Lachnospiraceae RepID=A7AZ02_RUMGN
UPF0237 protein HMPREF0991_00010 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ACT domain-containing protein
L3_106_079G1_scaffold_303_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5992..6789)
DNA (798bp) protein (266aa)
Metallo-beta-lactamase domain protein n=3 Tax=Lachnospiraceae RepID=A7AZ03_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49677.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Metal-dependent hydrolases of the beta-lactamase superfamily I
L3_106_079G1_scaffold_303_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6786..7367)
DNA (582bp) protein (194aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=3 Tax=Lachnospiraceae RepID=A7AZ04_RUMGN
L3_106_079G1_scaffold_303_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7370..9985)
DNA (2616bp) protein (872aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZ05_RUMGN
L3_106_079G1_scaffold_303_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10041..10484)
DNA (444bp) protein (148aa)
Acetyltransferase (GNAT) family. (EC:2.3.1.-)
Acetyltransferase, GNAT family n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZ06_RUMGN
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDN79011.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_106_079G1_scaffold_303_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10589..11329)
DNA (741bp) protein (247aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Parvulin-like peptidyl-prolyl isomerase (EC:5.2.1.8)
PPIC-type PPIASE domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZ07_RUMGN
L3_106_079G1_scaffold_303_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11416..12042)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZ08_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN79013.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Predicted integral membrane protein
L3_106_079G1_scaffold_303_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12039..12311)
DNA (273bp) protein (91aa)
Transcriptional regulator, ArsR family n=4 Tax=Clostridiales RepID=A7AZ09_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20419.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
transcriptional regulator, ArsR family
L3_106_079G1_scaffold_303_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12705..13250
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C072_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20420.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hydroxydechloroatrazine ethylaminohydrolase
L3_106_079G1_scaffold_303_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13345..13818
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZ12_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN79017.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hydroxydechloroatrazine ethylaminohydrolase
L3_106_079G1_scaffold_303_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13900..14157
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C024_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20422.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
uracil-xanthine permease
Displaying 17 items

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