ggKbase home page

L3_106_079G1_scaffold_348

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_079G1_scaffold_348_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(363..626)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036575B2
Uncharacterized protein {ECO:0000313|EMBL:EJF39351.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L3_106_079G1_scaffold_348_2
unknown

Not on your lists

comp(888..1130)
DNA (243bp) protein (81aa)

This feature has no annotations

L3_106_079G1_scaffold_348_3
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1234..2076
DNA (843bp) protein (281aa)
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase (EC:3.2.2.- 4.2.99.18)
8-oxoguanine DNA glycosylase n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036C7ED2
8-oxoguanine DNA glycosylase, N-terminal domain protein {ECO:0000313|EMBL:EJF39340.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L3_106_079G1_scaffold_348_4
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2281..3219
DNA (939bp) protein (313aa)
Fructose-1 6-bisphosphate aldolase class II n=1 Tax=Clostridium sp. CAG:138 RepID=R6B1U3_9CLOT
Fructose-1 6-bisphosphate aldolase class II {ECO:0000313|EMBL:CDA52941.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
fructose-1,6-bisphosphate aldolase
L3_106_079G1_scaffold_348_5
unknown

Not on your lists

comp(3278..3532)
DNA (255bp) protein (85aa)

This feature has no annotations

L3_106_079G1_scaffold_348_6
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3686..4336
DNA (651bp) protein (217aa)
HPr(Ser) phosphatase n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GI53_EUBLK
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:AKB17987.1}; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;"
Haloacid dehalogenase-like hydrolase
L3_106_079G1_scaffold_348_7
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4352..5131
DNA (780bp) protein (260aa)
Phenazine biosynthesis protein PhzF family n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JIE8_CELLD
phenazine biosynthesis protein PhzF family
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:ADZ84314.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_106_079G1_scaffold_348_8
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(5186..6193)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZK98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30887.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L3_106_079G1_scaffold_348_9
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6223..6915)
DNA (693bp) protein (231aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VSD9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06170.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L3_106_079G1_scaffold_348_10
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7162..9921
DNA (2760bp) protein (920aa)
preprotein translocase subunit SecA n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036EB9E1
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
secA; Protein translocase subunit SecA
L3_106_079G1_scaffold_348_11
unknown

Not on your lists

comp(10042..10272)
DNA (231bp) protein (77aa)

This feature has no annotations

L3_106_079G1_scaffold_348_12
Clostridium sp. CAG:557, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10292..10633)
DNA (342bp) protein (114aa)
Putative membrane associated protein n=1 Tax=Clostridium sp. CAG:557 RepID=R6GQB3_9CLOT
Putative membrane associated protein {ECO:0000313|EMBL:CDB23884.1}; TaxID=1262819 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:557.;"
TM2 domain-containing protein
L3_106_079G1_scaffold_348_13
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10867..11472)
DNA (606bp) protein (202aa)
Chaperone protein DnaJ n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E7U3_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
chaperone protein DnaJ
Displaying 13 items

View Taxonomy