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L3_106_079G1_scaffold_365

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_079G1_scaffold_365_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..200)
DNA (198bp) protein (66aa)
GTP-binding protein YchF n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003656192
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
GTP-binding protein YchF
L3_106_079G1_scaffold_365_2
Clostridium sp. CAG:557, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(299..2446)
DNA (2148bp) protein (716aa)
Tex-like protein N-terminal domain protein n=1 Tax=Clostridium sp. CAG:557 RepID=R6GTV1_9CLOT
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:CDB24706.1}; TaxID=1262819 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:557.;"
Transcriptional accessory protein
L3_106_079G1_scaffold_365_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2792..3187
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TRY6_CLOBB
thioesterase family protein
Uncharacterized protein {ECO:0000313|EMBL:ACD24320.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_106_079G1_scaffold_365_4
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3202..3879
DNA (678bp) protein (226aa)
Haloacid dehalogenase-like hydrolase n=1 Tax=Clostridium sp. MSTE9 RepID=J1HBK0_9CLOT
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:EJF42743.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
HAD-superfamily hydrolase
L3_106_079G1_scaffold_365_5
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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4294..4905
DNA (612bp) protein (204aa)
acetyltransferase, GNAT family (EC:2.3.1.-)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IGL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20946.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L3_106_079G1_scaffold_365_6
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4938..5663
DNA (726bp) protein (242aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=N9ZNX4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ53218.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
serine/threonine protein kinase
L3_106_079G1_scaffold_365_7
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5768..5974)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036EF6CA
Sigma-70, region 4 {ECO:0000313|EMBL:EJF41526.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
L3_106_079G1_scaffold_365_8
unknown

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comp(5919..6413)
DNA (495bp) protein (165aa)

This feature has no annotations

L3_106_079G1_scaffold_365_9
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6609..7223
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0WYU6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF41501.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L3_106_079G1_scaffold_365_10
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7307..8386
DNA (1080bp) protein (360aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
tRNA-5-methylaminomethyl-2-thiouridylate-methyltransferase (EC:2.8.1.1)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Clostridium leptum DSM 753 RepID=A7VNC9_9CLOT
L3_106_079G1_scaffold_365_11
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8426..9118
DNA (693bp) protein (231aa)
CpXC protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0NA86_9CLOT
CpXC protein {ECO:0000313|EMBL:EJF41497.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_106_079G1_scaffold_365_12
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9144..10784
DNA (1641bp) protein (547aa)
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:EJF41524.1}; EC=6.3.5.4 {ECO:0000313|EMBL:EJF41524.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Clostridium sp. MSTE9 RepID=J0N3Y0_9CLOT
Displaying 12 items

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