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L3_106_079G1_scaffold_434

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_079G1_scaffold_434_1
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..230
DNA (228bp) protein (76aa)
Plasmid mobilization protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6F515_9FIRM
Plasmid mobilization protein {ECO:0000313|EMBL:CDA97102.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
L3_106_079G1_scaffold_434_2
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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231..1619
DNA (1389bp) protein (463aa)
Type IV secretory pathway VirD4 component n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EKA9_9FIRM
Type IV secretory pathway VirD4 component {ECO:0000313|EMBL:CDA97101.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
Type IV secretory pathway, VirD4 component
L3_106_079G1_scaffold_434_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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1698..3281
DNA (1584bp) protein (528aa)
CHC2 zinc finger domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FMA5_9CLOT
CHC2 zinc finger domain protein {ECO:0000313|EMBL:EEA82845.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_106_079G1_scaffold_434_4
unknown

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3271..3474
DNA (204bp) protein (68aa)

This feature has no annotations

L3_106_079G1_scaffold_434_5
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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3452..4516
DNA (1065bp) protein (355aa)
DNA-binding helix-turn-helix protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EMB2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDA98269.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
L3_106_079G1_scaffold_434_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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4585..5673
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR60_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81478.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_106_079G1_scaffold_434_7
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5621..6112
DNA (492bp) protein (164aa)
Single-stranded DNA-binding protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H3J1_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
single-strand binding protein
L3_106_079G1_scaffold_434_8
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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6171..6437
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XUW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13479.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Prevent-host-death family protein
L3_106_079G1_scaffold_434_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6442..6753
DNA (312bp) protein (104aa)
RelE/StbE family addiction module toxin n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PS68_9BACT
Plasmid stabilisation system protein
Plasmid stabilisation system protein {ECO:0000313|EMBL:CCO03959.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_106_079G1_scaffold_434_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6832..7146
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FMA1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82841.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_106_079G1_scaffold_434_11
unknown

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7279..7830
DNA (552bp) protein (184aa)

This feature has no annotations

Displaying 11 items

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