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L3_106_079G1_scaffold_468

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_079G1_scaffold_468_1
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(100..654)
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J8W7_DESRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABO51520.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
L3_106_079G1_scaffold_468_2
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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910..1470
DNA (561bp) protein (187aa)
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Clostridiales RepID=N2A1N3_9CLOT
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EMZ19910.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
sigG; RNA polymerase sigma-G factor
L3_106_079G1_scaffold_468_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1882..2736)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67738.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
AraC-type DNA-binding domain-containing proteins
L3_106_079G1_scaffold_468_4
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(3136..3531)
DNA (396bp) protein (132aa)
Uncharacterized protein n=7 Tax=Enterococcus faecium RepID=J6B8C9_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EJX79313.1}; TaxID=1134828 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium P1123.;"
hypothetical protein
L3_106_079G1_scaffold_468_5
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(3521..3733)
DNA (213bp) protein (71aa)
DNA-binding helix-turn-helix protein n=8 Tax=Enterococcus faecium RepID=J5ZYF1_ENTFC
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EJX79314.1}; TaxID=1134828 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium P1123.;"
hypothetical protein
L3_106_079G1_scaffold_468_6
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4016..4651)
DNA (636bp) protein (212aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1BFC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68768.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Predicted transcriptional regulator
L3_106_079G1_scaffold_468_7
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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5215..6183
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MCK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68769.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Putative phage replication protein RstA
L3_106_079G1_scaffold_468_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6195..6401
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NI05_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQJ55331.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_106_079G1_scaffold_468_9
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6478..7029
DNA (552bp) protein (184aa)
Site-specific recombinase, phage integrase family n=2 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SS61_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFP59624.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
Site-specific recombinase XerD
L3_106_079G1_scaffold_468_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7016..7120)
DNA (105bp) protein (35aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTB3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80704.1}; Flags: Fragment;; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Displaying 10 items

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