ggKbase home page

L3_106_079G1_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_079G1_scaffold_18_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32..373
DNA (342bp) protein (114aa)
Uncharacterized protein n=13 Tax=Bacteroidales RepID=Q5LEL0_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY66065.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_106_079G1_scaffold_18_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

453..1115
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9DXG7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXY91170.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_106_079G1_scaffold_18_3
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1189..1500
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7IKM1_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI01944.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
hypothetical protein
L3_106_079G1_scaffold_18_4
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1541..1909
DNA (369bp) protein (123aa)
Uncharacterized protein n=12 Tax=Bacteroidetes RepID=B3CC65_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI01974.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
hypothetical protein
L3_106_079G1_scaffold_18_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1954..2919
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. D22 RepID=D7JBB0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXY91172.1}; Flags: Fragment;; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_106_079G1_scaffold_18_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3001..3993
DNA (993bp) protein (331aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7L7K3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM96956.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
hypothetical protein
L3_106_079G1_scaffold_18_7
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4075..4566
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=2 Tax=Bacteroides RepID=D7IKL8_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI01941.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
hypothetical protein
L3_106_079G1_scaffold_18_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4589..5140
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=2 Tax=Bacteroides eggerthii RepID=E5X3W2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXY91140.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
hypothetical protein
L3_106_079G1_scaffold_18_9
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5182..5646
DNA (465bp) protein (155aa)
Uncharacterized protein n=5 Tax=Bacteroidetes RepID=F3XPQ6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EOS20072.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
hypothetical protein
L3_106_079G1_scaffold_18_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5709..6686
DNA (978bp) protein (326aa)
Uncharacterized protein n=7 Tax=Bacteroidetes RepID=K9EAK4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXY91166.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
hypothetical protein
L3_106_079G1_scaffold_18_11
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6683..7273
DNA (591bp) protein (197aa)
Uncharacterized protein n=9 Tax=Bacteroidetes RepID=B3CCH3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV28162.1}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
hypothetical protein
L3_106_079G1_scaffold_18_12
Bacteroides intestinalis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7302..7688)
DNA (387bp) protein (129aa)
Uncharacterized protein n=4 Tax=Bacteroidetes RepID=B3CCH4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV02992.1}; TaxID=471870 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides intestinalis DSM 17393.;"
hypothetical protein
L3_106_079G1_scaffold_18_13
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7685..8080)
DNA (396bp) protein (132aa)
Uncharacterized protein n=6 Tax=Bacteroidetes RepID=B3CCH5_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI01905.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
hypothetical protein
L3_106_079G1_scaffold_18_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8085..8366)
DNA (282bp) protein (94aa)
Uncharacterized protein n=10 Tax=Bacteroidetes RepID=B3CCH6_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY19909.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_106_079G1_scaffold_18_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8521..10530)
DNA (2010bp) protein (670aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I9HZW1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY66054.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Type IV secretory pathway, VirD4 components
L3_106_079G1_scaffold_18_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10568..11713)
DNA (1146bp) protein (382aa)
Relaxase/mobilization nuclease domain protein n=3 Tax=Bacteroidetes RepID=F3XPP6_9FLAO
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EXY91119.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
Relaxase/Mobilisation nuclease domain.
L3_106_079G1_scaffold_18_17
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11707..12129)
DNA (423bp) protein (141aa)
Uncharacterized protein n=12 Tax=Bacteroidetes RepID=B3JGB8_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY47499.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
L3_106_079G1_scaffold_18_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12833..13585
DNA (753bp) protein (251aa)
ATPases involved in chromosome partitioning n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IN63_9BACT
ATPases involved in chromosome partitioning
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:KDS51661.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_106_079G1_scaffold_18_19
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13592..14014
DNA (423bp) protein (141aa)
Uncharacterized protein n=9 Tax=Bacteroidetes RepID=B3JGC2_9BACE
Protein of unknown function (DUF3408).
Uncharacterized protein {ECO:0000313|EMBL:EDV01970.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
L3_106_079G1_scaffold_18_20
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14058..14477
DNA (420bp) protein (140aa)
Uncharacterized protein n=4 Tax=Bacteroidetes RepID=F3XPP1_9FLAO
Protein of unknown function (DUF3408).
Uncharacterized protein {ECO:0000313|EMBL:CBK64377.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_106_079G1_scaffold_18_21
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14474..15214
DNA (741bp) protein (247aa)
Conserved domain protein n=7 Tax=Bacteroidetes RepID=F3XPP0_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK64378.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_106_079G1_scaffold_18_22
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15360..15662
DNA (303bp) protein (101aa)
Conjugative transposon protein TraE n=8 Tax=Bacteroidetes RepID=F3XPN9_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKU87927.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
L3_106_079G1_scaffold_18_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15686..16009
DNA (324bp) protein (108aa)
Conjugative transposon protein TraF n=8 Tax=Bacteroidetes RepID=F3PNL1_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ29033.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
L3_106_079G1_scaffold_18_24
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16006..18501
DNA (2496bp) protein (832aa)
TraG family conjugation system ATPase n=1 Tax=Parabacteroides goldsteinii dnLKV18 RepID=S0GUS4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGM96939.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
conjugal transfer protein TraG
L3_106_079G1_scaffold_18_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18516..18830
DNA (315bp) protein (105aa)
Uncharacterized protein n=14 Tax=Bacteroidetes RepID=B3CCJ0_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGM96938.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L3_106_079G1_scaffold_18_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18866..19486
DNA (621bp) protein (207aa)
Conjugative transposon protein TraI n=4 Tax=Bacteroidales RepID=F3PNK5_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY66041.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_106_079G1_scaffold_18_27
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19506..20585
DNA (1080bp) protein (360aa)
Homologues of TraJ from Bacteroides conjugative transposon n=4 Tax=Bacteroidales RepID=D4IN71_9BACT
Homologues of TraJ from Bacteroides conjugative transposon.
Homologues of TraJ from Bacteroides conjugative transposon {ECO:0000313|EMBL:CBK64383.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_106_079G1_scaffold_18_28
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20597..21220
DNA (624bp) protein (208aa)
Conjugative transposon TraK protein n=18 Tax=root RepID=B3CCJ3_9BACE
hypothetical protein
Conjugative transposon TraK protein {ECO:0000313|EMBL:EDY96800.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
L3_106_079G1_scaffold_18_29
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21225..21524
DNA (300bp) protein (100aa)
Uncharacterized protein n=4 Tax=root RepID=F3PNK2_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK64385.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_106_079G1_scaffold_18_30
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21499..22779
DNA (1281bp) protein (427aa)
Conjugative transposon TraM protein n=3 Tax=Bacteroidales RepID=F3PNK1_9BACE
Protein of unknown function (DUF3714).
Conjugative transposon TraM protein {ECO:0000313|EMBL:EGF59740.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
Displaying items 1-30 of 118 in total

View Taxonomy