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L3_108_000G1_scaffold_1528

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_1528_1
Geobacillus caldoxylosilyticus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2..361
DNA (360bp) protein (120aa)
transposase IS605 n=1 Tax=Butyrivibrio sp. AE2015 RepID=UPI0003B4FB46
Putative transposase {ECO:0000313|EMBL:GAJ40745.1}; TaxID=1220594 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus caldoxylosilyticus NBRC 107762.;"
tlpB; transposase-like protein B
L3_108_000G1_scaffold_1528_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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525..2801
DNA (2277bp) protein (759aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
UvrD/REP helicase (EC:3.6.1.-)
UvrD/REP helicase n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B79BD7
L3_108_000G1_scaffold_1528_3
Segniliparus rotundus, Segniliparus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2828..3922
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578) RepID=D6ZFD3_SEGRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG97657.1}; TaxID=640132 species="Bacteria; Actinobacteria; Corynebacteriales; Segniliparaceae; Segniliparus.;" source="Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 /; DSM 44985 / JCM 13578).;"
L3_108_000G1_scaffold_1528_4
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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3959..5338
DNA (1380bp) protein (460aa)
cca; tRNA nucleotidyltransferase (EC:2.7.7.-)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JMM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS35358.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L3_108_000G1_scaffold_1528_5
unknown

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5349..5582
DNA (234bp) protein (78aa)

This feature has no annotations

L3_108_000G1_scaffold_1528_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5605..6348
DNA (744bp) protein (248aa)
CRISPR-associated protein cas5 n=9 Tax=Clostridium RepID=G5HYF8_9CLOT
CRISPR-associated protein cas5, subtype I-c/dvulg {ECO:0000313|EMBL:ENZ65664.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
CRISPR-associated protein, Csd5d family
L3_108_000G1_scaffold_1528_7
Syntrophomonas wolfei, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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6329..8131
DNA (1803bp) protein (601aa)
CRISPR-associated protein cas8c/csd1, subtype I-c/dvulg n=1 Tax=Clostridium bolteae 90B8 RepID=R0BL16_9CLOT
hypothetical protein
CRISPR-associated protein, Csd1 family {ECO:0000313|EMBL:ABI67812.1}; TaxID=335541 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen).;"
L3_108_000G1_scaffold_1528_8
Eggerthella sp. CAG:298, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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8134..9051
DNA (918bp) protein (306aa)
CRISPR-associated protein Csd2 family n=1 Tax=Eggerthella sp. CAG:298 RepID=R7AN39_9ACTN
CRISPR-associated protein Csd2 family {ECO:0000313|EMBL:CDD59790.1}; TaxID=1262876 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:298.;"
CRISPR-associated protein, Csd2 family
L3_108_000G1_scaffold_1528_9
unknown

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comp(9768..9965)
DNA (198bp) protein (66aa)

This feature has no annotations

L3_108_000G1_scaffold_1528_10
unknown

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10818..12380
DNA (1563bp) protein (521aa)

This feature has no annotations

L3_108_000G1_scaffold_1528_11
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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12608..13186
DNA (579bp) protein (193aa)
Flagellar protein FliS n=2 Tax=Eggerthella RepID=E5XAG5_9ACTN
Putative flagellar protein FliS {ECO:0000313|EMBL:EGC90611.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
hypothetical protein
L3_108_000G1_scaffold_1528_12
unknown

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13216..13569
DNA (354bp) protein (118aa)

This feature has no annotations

L3_108_000G1_scaffold_1528_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13550..14374
DNA (825bp) protein (275aa)
Sortase, SrtB family n=1 Tax=Turicibacter sp. HGF1 RepID=F0HCG1_9FIRM
hypothetical protein
Sortase B {ECO:0000313|EMBL:EIA18243.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_108_000G1_scaffold_1528_14
unknown

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14451..15131
DNA (681bp) protein (227aa)

This feature has no annotations

L3_108_000G1_scaffold_1528_15
unknown

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15135..15266
DNA (132bp) protein (44aa)

This feature has no annotations

L3_108_000G1_scaffold_1528_16
unknown

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15259..15519
DNA (261bp) protein (87aa)

This feature has no annotations

L3_108_000G1_scaffold_1528_17
unknown

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15821..16171
DNA (351bp) protein (117aa)

This feature has no annotations

L3_108_000G1_scaffold_1528_18
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16297..16740
DNA (444bp) protein (148aa)
kinase-like protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2DE03
Uncharacterized protein {ECO:0000313|EMBL:EGC75596.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
Predicted kinase
L3_108_000G1_scaffold_1528_19
unknown

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16758..16940
DNA (183bp) protein (61aa)

This feature has no annotations

L3_108_000G1_scaffold_1528_20
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17251..17640
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AUF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86908.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_108_000G1_scaffold_1528_21
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17655..19949
DNA (2295bp) protein (765aa)
DNA ligase (EC:6.5.1.2)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=748727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC).;"
DNA ligase n=2 Tax=Clostridium RepID=D8GTR0_CLOLD
L3_108_000G1_scaffold_1528_22
unknown

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19974..20306
DNA (333bp) protein (111aa)

This feature has no annotations

L3_108_000G1_scaffold_1528_23
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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20562..21815
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IJC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY42170.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L3_108_000G1_scaffold_1528_24
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21819..22172
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UK05_RUMA7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU24001.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L3_108_000G1_scaffold_1528_25
unknown

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22283..22528
DNA (246bp) protein (82aa)

This feature has no annotations

L3_108_000G1_scaffold_1528_26
unknown

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22569..23111
DNA (543bp) protein (181aa)

This feature has no annotations

L3_108_000G1_scaffold_1528_27
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23254..24756
DNA (1503bp) protein (501aa)
Ribonuclease HI n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z1R8_EUBE2
Uncharacterized protein {ECO:0000313|EMBL:KDR95615.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
ribonuclease HI
L3_108_000G1_scaffold_1528_28
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

24806..26425
DNA (1620bp) protein (540aa)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HJZ2_9FIRM
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:CCY28444.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
phosphoesterase RecJ domain protein
L3_108_000G1_scaffold_1528_29
Methanobrevibacter ruminantium, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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26662..27447
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) RepID=D3E093_METRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC47817.1}; TaxID=634498 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM; 13430 / M1) (Methanobacterium ruminantium).;"
L3_108_000G1_scaffold_1528_30
unknown

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27461..27673
DNA (213bp) protein (71aa)

This feature has no annotations

Displaying items 1-30 of 65 in total

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