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L3_108_000G1_scaffold_1827

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_1827_1

Not on your lists

comp(530..742)
DNA (213bp) protein (71aa)
Protein containing Helix-turn-helix type 3 domain protein n=1 Tax=gut metagenome RepID=J9G4U5_9ZZZZ
Protein containing Helix-turn-helix type 3 domain protein {ECO:0000313|EMBL:EJX01889.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
L3_108_000G1_scaffold_1827_2
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(732..1034)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71856.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_108_000G1_scaffold_1827_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1056..1322)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71855.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_108_000G1_scaffold_1827_4
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1791..2018)
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF40218.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_108_000G1_scaffold_1827_5
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2401..3333)
DNA (933bp) protein (311aa)
Bile acid transporter n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS49_9FIRM
Sodium transporter {ECO:0000313|EMBL:KJF40217.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
transporter
L3_108_000G1_scaffold_1827_6
unknown

Not on your lists

comp(4948..5217)
DNA (270bp) protein (90aa)

This feature has no annotations

L3_108_000G1_scaffold_1827_7
unknown

Not on your lists

5400..5534
DNA (135bp) protein (45aa)

This feature has no annotations

L3_108_000G1_scaffold_1827_8
unknown

Not on your lists

6021..6710
DNA (690bp) protein (230aa)

This feature has no annotations

L3_108_000G1_scaffold_1827_9
unknown

Not on your lists

7303..7893
DNA (591bp) protein (197aa)

This feature has no annotations

L3_108_000G1_scaffold_1827_10
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8031..8309
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71849.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_108_000G1_scaffold_1827_11
Clostridium sp. CAG:508, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9150..9416
DNA (267bp) protein (89aa)
Txe/YoeB family addiction module toxin n=1 Tax=Clostridium sp. CAG:508 RepID=R6QKN0_9CLOT
Txe/YoeB family addiction module toxin {ECO:0000313|EMBL:CDC31431.1}; TaxID=1262815 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:508.;"
YoeB family toxin
L3_108_000G1_scaffold_1827_12
unknown

Not on your lists

9429..9563
DNA (135bp) protein (45aa)

This feature has no annotations

L3_108_000G1_scaffold_1827_13
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9892..10167
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF40211.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_108_000G1_scaffold_1827_14
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10298..10528
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:KJF40210.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_108_000G1_scaffold_1827_15
unknown

Not on your lists

10627..10722
DNA (96bp) protein (32aa)

This feature has no annotations

L3_108_000G1_scaffold_1827_16
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10768..11625
DNA (858bp) protein (286aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF40209.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_108_000G1_scaffold_1827_17
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11726..11938
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71845.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_108_000G1_scaffold_1827_18
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12021..12554
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71844.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_108_000G1_scaffold_1827_19
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12580..12930
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71843.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_108_000G1_scaffold_1827_20
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12946..13395
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71841.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_108_000G1_scaffold_1827_21
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13458..13964
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71827.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_108_000G1_scaffold_1827_22
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13994..14299
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71826.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_108_000G1_scaffold_1827_23
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14352..14597
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71825.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_108_000G1_scaffold_1827_24
unknown

Not on your lists

14594..14785
DNA (192bp) protein (64aa)

This feature has no annotations

L3_108_000G1_scaffold_1827_25
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14972..15226
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF40196.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_108_000G1_scaffold_1827_26
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15223..15375
DNA (153bp) protein (51aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71953.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_108_000G1_scaffold_1827_27
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15372..15722
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71952.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_108_000G1_scaffold_1827_28
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15719..15967
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF41236.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_108_000G1_scaffold_1827_29
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15964..16158
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF41235.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_108_000G1_scaffold_1827_30
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16158..16523
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF41234.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Displaying items 1-30 of 78 in total

View Taxonomy