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L3_108_000G1_scaffold_2

Search features with annotation key words

Displaying items 1-30 of 531 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_2_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..196
DNA (195bp) protein (65aa)
Beta-lactamase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BUA5_9CLOT
D-alanyl-D-alanine carboxypeptidase family protein
Beta-lactamase {ECO:0000313|EMBL:KJU72741.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_108_000G1_scaffold_2_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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642..1625
DNA (984bp) protein (328aa)
Choloylglycine hydrolase family protein n=3 Tax=Clostridium perfringens RepID=B1BWT3_CLOPF
linear amide C-N hydrolase, choloylglycine hydrolase family protein
Linear amide C-N hydrolase, choloylglycine hydrolase family protein {ECO:0000313|EMBL:AIY82789.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_2_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1970..2893
DNA (924bp) protein (308aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001, ECO:0000313|EMBL:AIY85138.1}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001, ECO:0000313|EMBL:AIY85138.1};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Aspartate carbamoyltransferase n=1 Tax=Clostridium colicanis 209318 RepID=N9XUT4_9CLOT
L3_108_000G1_scaffold_2_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2895..3320
DNA (426bp) protein (142aa)
Aspartate carbamoyltransferase, regulatory subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H736_9CLOT
aspartate carbamoyltransferase regulatory chain, allosteric domain protein
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein {ECO:0000313|EMBL:AIY82282.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_2_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3342..4538
DNA (1197bp) protein (399aa)
pyrC; dihydroorotase (EC:3.5.2.3)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00088289};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Dihydroorotase n=1 Tax=Clostridium colicanis 209318 RepID=N9WKR7_9CLOT
L3_108_000G1_scaffold_2_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4552..5421
DNA (870bp) protein (290aa)
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Clostridium colicanis 209318 RepID=N9WK29_9CLOT
L3_108_000G1_scaffold_2_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5433..6173
DNA (741bp) protein (247aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=2 Tax=Clostridium butyricum RepID=M8JIP9_CLOBU
oxidoreductase NAD-binding domain protein
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_2_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6186..7082
DNA (897bp) protein (299aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Dihydroorotate dehydrogenase n=1 Tax=Clostridium colicanis 209318 RepID=N9XUT9_9CLOT
dihydroorotate dehydrogenase family domain protein
L3_108_000G1_scaffold_2_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7108..7785
DNA (678bp) protein (226aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Orotate phosphoribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTR5_CLOBU
L3_108_000G1_scaffold_2_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8017..10248
DNA (2232bp) protein (744aa)
pflB; formate acetyltransferase (EC:2.3.1.54)
Formate acetyltransferase {ECO:0000313|EMBL:AIY83777.1}; EC=2.3.1.54 {ECO:0000313|EMBL:AIY83777.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Formate acetyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTR4_CLOBU
L3_108_000G1_scaffold_2_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10414..11130
DNA (717bp) protein (239aa)
pflA; pyruvate formate-lyase 1-activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Clostridium colicanis 209318 RepID=N9WK36_9CLOT
L3_108_000G1_scaffold_2_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11168..11440)
DNA (273bp) protein (91aa)
Uncharacterized protein {ECO:0000313|EMBL:KJU72751.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L3_108_000G1_scaffold_2_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11537..12154)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XUU4_9CLOT
3'-5' exonuclease family protein
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KJU72752.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_108_000G1_scaffold_2_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12397..13347
DNA (951bp) protein (317aa)
L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488, ECO:0000313|EMBL:AIY82888.1}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488, ECO:0000313|EMBL:AIY82888.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L-lactate dehydrogenase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y5K7_9CLOT
L3_108_000G1_scaffold_2_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13457..14470
DNA (1014bp) protein (338aa)
asnA; aspartate--ammonia ligase (EC:6.3.1.1)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Aspartate--ammonia ligase n=1 Tax=Clostridium colicanis 209318 RepID=N9WKS6_9CLOT
L3_108_000G1_scaffold_2_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14818..16284
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y6R3_9CLOT
cell envelope-related function transcriptional attenuator common domain protein
Cell envelope-related function transcriptional attenuator common domain protein {ECO:0000313|EMBL:AIY82862.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_2_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16396..17040
DNA (645bp) protein (215aa)
Peptidase M50 n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0V6_9CLOT
peptidase M50 family protein
Peptidase M50 family protein {ECO:0000313|EMBL:AIY84486.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_2_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17083..18591)
DNA (1509bp) protein (503aa)
Putative Ppx/GppA phosphatase family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EJF8_9CLOT
ppx/GppA phosphatase family protein
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:AIY83883.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_2_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19040..20734
DNA (1695bp) protein (565aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
argS; arginine--tRNA ligase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Clostridium colicanis 209318 RepID=N9WKT3_9CLOT
L3_108_000G1_scaffold_2_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21334..22479
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y2R8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82702.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_2_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22526..22657)
DNA (132bp) protein (44aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=Q0SSG0_CLOPS
virus attachment p12 family protein
Virus attachment p12 family protein {ECO:0000313|EMBL:AIY82586.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_2_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22674..24437)
DNA (1764bp) protein (588aa)
Ferrous iron transporter B n=1 Tax=Clostridium colicanis 209318 RepID=N9Y3P8_9CLOT
feoB; ferrous iron transport protein B
Ferrous iron transport protein B {ECO:0000313|EMBL:AIY84212.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_2_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24450..24671)
DNA (222bp) protein (74aa)
FeoA family protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M379_9CLOT
feoA domain protein
Iron transporter FeoA {ECO:0000313|EMBL:KJU72760.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_108_000G1_scaffold_2_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24882..25613
DNA (732bp) protein (244aa)
HAD hydrolase, family IB n=1 Tax=Clostridium colicanis 209318 RepID=N9WHT1_9CLOT
HAD phosphoserine phosphatase-like hydrolase, IB family protein
HAD phosphoserine phosphatase-like hydrolase, IB family protein {ECO:0000313|EMBL:AIY84078.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_2_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25628..26413
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y2R3_9CLOT
RNase H superfamily protein
Uncharacterized protein {ECO:0000313|EMBL:KJU72762.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_108_000G1_scaffold_2_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26487..27257
DNA (771bp) protein (257aa)
Putative Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EQD2_9CLOT
endonuclease/Exonuclease/phosphatase family protein
Endonuclease/Exonuclease/phosphatase family protein {ECO:0000313|EMBL:AIY84718.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_2_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27288..28154)
DNA (867bp) protein (289aa)
Putative Beta-lactamase domain-containing protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FL79_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU72764.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
metallo-beta-lactamase superfamily protein
L3_108_000G1_scaffold_2_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28268..28978
DNA (711bp) protein (237aa)
1-acylglycerol-3-phosphate O-acyltransferases domain protein (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
1-acylglycerol-3-phosphate O-acyltransferase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y3P1_9CLOT
L3_108_000G1_scaffold_2_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29309..31060
DNA (1752bp) protein (584aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WH80_9CLOT
hypothetical protein
Phosphoenolpyruvate carboxykinase {ECO:0000313|EMBL:KJU72766.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_108_000G1_scaffold_2_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31062..31634)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y3M0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83569.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Displaying items 1-30 of 531 in total

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