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L3_108_000G1_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 448 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_4_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..345
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XMV3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU73112.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_108_000G1_scaffold_4_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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357..1397
DNA (1041bp) protein (347aa)
CotS family spore coat protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XZL8_9CLOT
spore coat , CotS family protein
Spore coat, CotS family protein {ECO:0000313|EMBL:AIY82422.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_4_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1752..2861
DNA (1110bp) protein (370aa)
Membrane lipoprotein tmpc n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BZA1_9CLOT
tmpC; membrane lipoprotein tmpC
Membrane lipoprotein tmpC {ECO:0000313|EMBL:AIY85054.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_4_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2935..4464
DNA (1530bp) protein (510aa)
Putative Probable ABC transporter n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FKC7_9CLOT
ABC transporter family protein
ABC transporter family protein {ECO:0000313|EMBL:AIY84181.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_4_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4454..5545
DNA (1092bp) protein (364aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Paenibacillus sp. HGF5 RepID=F3MEH8_9BACL
branched-chain amino acid transport system / permease component family protein
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:AIY84117.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_4_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5547..6497
DNA (951bp) protein (317aa)
ABC transporter, permease protein n=9 Tax=Clostridium perfringens RepID=H7CWV8_CLOPF
branched-chain amino acid transport system / permease component family protein
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:AIY84299.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_4_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6707..7825)
DNA (1119bp) protein (373aa)
Glycosyl transferase, group 1 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLN9_CLOSA
glycosyl transferases group 1 family protein
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:AIY84693.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_4_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7932..8933
DNA (1002bp) protein (334aa)
Spore coat protein S n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BU97_9CLOT
spore coat , CotS family protein
Spore coat, CotS family protein {ECO:0000313|EMBL:AIY85108.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_4_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9050..9937
DNA (888bp) protein (296aa)
Putative Sporulation peptidase YabG n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENC2_9CLOT
yabG; sporulation peptidase YabG
Sporulation peptidase YabG {ECO:0000313|EMBL:AIY83396.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_4_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10030..10353
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJ82_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU73230.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_108_000G1_scaffold_4_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10709..12268
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WDC3_9CLOT
lysM domain protein
LysM domain protein {ECO:0000313|EMBL:AIY82805.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_4_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12387..13232
DNA (846bp) protein (282aa)
cyanophycinase (EC:3.4.15.6)
Cyanophycinase {ECO:0000313|EMBL:AIY84590.1}; EC=3.4.15.6 {ECO:0000313|EMBL:AIY84590.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Cyanophycinase CphB n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPB6_CLOSA
L3_108_000G1_scaffold_4_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13204..15810
DNA (2607bp) protein (869aa)
Cyanophycin synthetase {ECO:0000313|EMBL:AIY84798.1}; EC=6.3.2.29 {ECO:0000313|EMBL:AIY84798.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
cphA; cyanophycin synthetase (EC:6.3.2.29)
Cyanophycin synthetase n=1 Tax=Clostridium colicanis 209318 RepID=N9XYP2_9CLOT
L3_108_000G1_scaffold_4_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16004..16846
DNA (843bp) protein (281aa)
ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Clostridium colicanis 209318 RepID=N9XMU1_9CLOT
L3_108_000G1_scaffold_4_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16906..17544
DNA (639bp) protein (213aa)
Stage II sporulation protein R n=1 Tax=Clostridium colicanis 209318 RepID=N9XZK7_9CLOT
spoIIR; stage II sporulation protein R
Stage II sporulation protein R {ECO:0000313|EMBL:AIY84257.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_4_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17661..18650
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WDB6_9CLOT
tRNA methyl transferase family protein
tRNA methyl transferase family protein {ECO:0000313|EMBL:AIY83945.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_4_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18662..19075
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WDV7_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82265.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_4_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19195..19488
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EJL3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82737.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_4_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19696..21315
DNA (1620bp) protein (540aa)
pyrG; CTP synthase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
CTP synthase n=1 Tax=Clostridium colicanis 209318 RepID=N9XYN8_9CLOT
L3_108_000G1_scaffold_4_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21516..22979
DNA (1464bp) protein (488aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884, ECO:0000313|EMBL:AIY84191.1}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Transcription termination factor Rho n=1 Tax=Clostridium colicanis 209318 RepID=N9XMT6_9CLOT
rho; transcription termination factor Rho
L3_108_000G1_scaffold_4_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23014..24117)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XZK1_9CLOT
glycosyl transferases group 1 family protein
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:AIY82736.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_4_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24234..24437)
DNA (204bp) protein (68aa)
50S ribosomal protein L31 n=1 Tax=Clostridium colicanis 209318 RepID=N9WDB1_9CLOT
rpmE; ribosomal protein L31
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_4_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24611..25198
DNA (588bp) protein (196aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Thymidine kinase n=1 Tax=Clostridium colicanis 209318 RepID=N9WDV4_9CLOT
thymidine kinase family protein
L3_108_000G1_scaffold_4_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25213..26985
DNA (1773bp) protein (591aa)
Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8R2_9CLOT
Protein-(Glutamine-N5) methyltransferase, release factor-specific {ECO:0000313|EMBL:AIY82652.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
prmC; protein-(glutamine-N5) methyltransferase, release factor-specific
L3_108_000G1_scaffold_4_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27035..28120
DNA (1086bp) protein (362aa)
Peptide chain release factor 1 n=1 Tax=Clostridium sp. CAG:221 RepID=R6GNP7_9CLOT
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093, ECO:0000313|EMBL:AIY82605.1}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_4_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28184..28771
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XZJ6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83076.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_4_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28789..29832
DNA (1044bp) protein (348aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WDA5_9CLOT
tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family
L3_108_000G1_scaffold_4_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29851..30303
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WDU9_9CLOT
low molecular weight phosphotyrosine phosphatase family protein
Low molecular weight phosphotyrosine phosphatase family protein {ECO:0000313|EMBL:AIY83829.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_108_000G1_scaffold_4_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30379..30828
DNA (450bp) protein (150aa)
rpiB; ribose 5-phosphate isomerase B (EC:5.3.1.6)
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:AIY83624.1}; EC=5.3.1.6 {ECO:0000313|EMBL:AIY83624.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
RpiB/LacA/LacB family sugar-phosphate isomerase n=1 Tax=Clostridium colicanis 209318 RepID=N9XYM6_9CLOT
L3_108_000G1_scaffold_4_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30846..31475
DNA (630bp) protein (210aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
Uracil phosphoribosyltransferase n=1 Tax=Clostridium colicanis 209318 RepID=N9XMS6_9CLOT
Displaying items 1-30 of 448 in total

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